Cow genome map
| Conread name: | Pig2-110L12 |
| Conread position: | 2-139 |
| Cow position: | chr13:21135922-21135785 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 2-142 |
| Cow position: | chr13:19279073-19279209 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 105 |
| Conread position: | 2-166 |
| Cow position: | chr13:11381744-11381579 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 2-168 |
| Cow position: | chr13:18058271-18058104 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 149 |
| Conread position: | 2-168 |
| Cow position: | chr13:20440602-20440444 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 139, 67 |
| Conread position: | 2-172 |
| Cow position: | chr13:17569123-17568950 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-174 |
| Cow position: | chr13:54389042-54388870 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 142 |
| Conread position: | 2-210 |
| Cow position: | chr13:49503553-49503345 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 46 |
| Conread position: | 2-211 |
| Cow position: | chr13:41806751-41806964 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 2-222 |
| Cow position: | chr13:17439792-17439571 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 2-224 |
| Cow position: | chr13:19883058-19882838 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 2-225 |
| Cow position: | chr13:563164-562940 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 2-225 |
| Cow position: | chr13:1042990-1042758 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 2-225 |
| Cow position: | chr13:13089004-13089222 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 2-225 |
| Cow position: | chr13:13265785-13266000 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 77 |
| Conread position: | 2-225 |
| Cow position: | chr13:15885043-15884815 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 2-225 |
| Cow position: | chr13:17800050-17800270 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 103 |
| Conread position: | 2-225 |
| Cow position: | chr13:17821291-17821061 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-225 |
| Cow position: | chr13:18172315-18172538 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 165 |
| Conread position: | 2-225 |
| Cow position: | chr13:20864037-20863820 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 2-225 |
| Cow position: | chr13:25531813-25531590 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 41, 169 |
| Conread position: | 2-225 |
| Cow position: | chr13:25817505-25817711 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 67, 94 |
| Conread position: | 2-225 |
| Cow position: | chr13:43480036-43480259 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 2-225 |
| Cow position: | chr13:43762147-43762363 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 2-225 |
| Cow position: | chr13:45023233-45023010 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 33 |
| Conread position: | 2-225 |
| Cow position: | chr13:55316212-55315991 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 62, 181 |
| Conread position: | 3-172 |
| Cow position: | chr13:26698520-26698348 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 3-183 |
| Cow position: | chr13:16024569-16024753 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 3-212 |
| Cow position: | chr13:17745223-17745424 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 93 |
| Conread position: | 4-203 |
| Cow position: | chr13:53573949-53574145 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 5-225 |
| Cow position: | chr13:57494208-57493985 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 7-225 |
| Cow position: | chr13:43184891-43184675 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 8-225 |
| Cow position: | chr13:37069330-37069547 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 165 |
| Conread position: | 9-205 |
| Cow position: | chr13:19188287-19188482 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 9-225 |
| Cow position: | chr13:47756355-47756572 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 30-221 |
| Cow position: | chr13:60974089-60974272 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 38-225 |
| Cow position: | chr13:4664853-4664664 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 86 |
| Conread position: | 44-225 |
| Cow position: | chr13:2884069-2884251 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 154 |
| Conread position: | 44-225 |
| Cow position: | chr13:12546892-12546707 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 68-224 |
| Cow position: | chr13:52585978-52585823 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 80 |
Show alignments to all cow chromosomes.