Cow genome map
| Conread name: | Pig2-110L12 |
| Conread position: | 1-225 |
| Cow position: | chr16:11105562-11105336 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 2-131 |
| Cow position: | chr16:17903638-17903771 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-164 |
| Cow position: | chr16:7505096-7504932 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-168 |
| Cow position: | chr16:17945528-17945362 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 61, 118 |
| Conread position: | 2-195 |
| Cow position: | chr16:51500939-51500753 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 138, 29 |
| Conread position: | 2-196 |
| Cow position: | chr16:17282670-17282483 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 2-205 |
| Cow position: | chr16:51069910-51070121 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 2-211 |
| Cow position: | chr16:35168737-35168526 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 2-221 |
| Cow position: | chr16:13689673-13689455 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 2-223 |
| Cow position: | chr16:54679676-54679456 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 2-225 |
| Cow position: | chr16:4626384-4626608 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 2-225 |
| Cow position: | chr16:22868171-22868388 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 121, 26 |
| Conread position: | 2-225 |
| Cow position: | chr16:25839627-25839404 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 67, 204 |
| Conread position: | 2-225 |
| Cow position: | chr16:33226531-33226745 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 2-225 |
| Cow position: | chr16:40333317-40333538 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 2-225 |
| Cow position: | chr16:40562239-40562014 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-225 |
| Cow position: | chr16:47620386-47620167 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 67, 45 |
| Conread position: | 2-225 |
| Cow position: | chr16:47820575-47820358 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 61, 74 |
| Conread position: | 2-225 |
| Cow position: | chr16:48494547-48494769 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 67, 118 |
| Conread position: | 2-279 |
| Cow position: | chr16:4145073-4144797 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 168 |
| Conread position: | 3-165 |
| Cow position: | chr16:33198431-33198591 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 61, 73 |
| Conread position: | 3-183 |
| Cow position: | chr16:31079085-31079272 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 3-226 |
| Cow position: | chr16:16424604-16424818 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 4-225 |
| Cow position: | chr16:56231832-56231610 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 5-224 |
| Cow position: | chr16:53508980-53509202 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 8-167 |
| Cow position: | chr16:38243660-38243821 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 9-203 |
| Cow position: | chr16:591811-592007 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 120, 44 |
| Conread position: | 9-225 |
| Cow position: | chr16:44973494-44973283 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 10-235 |
| Cow position: | chr16:29380248-29380030 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 113, 16 |
| Conread position: | 12-178 |
| Cow position: | chr16:44744136-44744308 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 12-225 |
| Cow position: | chr16:10148279-10148068 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 12-225 |
| Cow position: | chr16:13969374-13969592 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 12-225 |
| Cow position: | chr16:31978189-31978401 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 26-225 |
| Cow position: | chr16:53613288-53613085 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 32-224 |
| Cow position: | chr16:48191026-48191213 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 37-225 |
| Cow position: | chr16:38905255-38905439 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 112 |
| Conread position: | 41-225 |
| Cow position: | chr16:8840865-8840679 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 115 |
| Conread position: | 43-225 |
| Cow position: | chr16:56845928-56846110 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 49-225 |
| Cow position: | chr16:24228388-24228563 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 69, 123 |
| Conread position: | 63-225 |
| Cow position: | chr16:29399947-29399781 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 68-225 |
| Cow position: | chr16:25484306-25484154 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 81 |
| Conread position: | 75-193 |
| Cow position: | chr16:53891847-53891967 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.