Cow genome map
| Conread name: | Pig2-110L12 |
| Conread position: | 2-136 |
| Cow position: | chr17:21758094-21758224 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 2-152 |
| Cow position: | chr17:32009393-32009540 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 2-218 |
| Cow position: | chr17:17682857-17683063 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 2-221 |
| Cow position: | chr17:21243740-21243955 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 139, 67 |
| Conread position: | 2-221 |
| Cow position: | chr17:24883524-24883736 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 2-224 |
| Cow position: | chr17:12447354-12447570 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 2-224 |
| Cow position: | chr17:21003779-21004002 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 158 |
| Conread position: | 2-225 |
| Cow position: | chr17:908787-908574 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 67, 16 |
| Conread position: | 2-225 |
| Cow position: | chr17:1410191-1410415 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 2-225 |
| Cow position: | chr17:10458889-10459108 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 2-225 |
| Cow position: | chr17:12591216-12590991 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-225 |
| Cow position: | chr17:17059471-17059267 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-225 |
| Cow position: | chr17:20022467-20022689 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 67, 183 |
| Conread position: | 2-225 |
| Cow position: | chr17:24587671-24587446 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-225 |
| Cow position: | chr17:25612137-25611921 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 2-225 |
| Cow position: | chr17:26765065-26764841 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 2-225 |
| Cow position: | chr17:32419069-32419290 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 2-225 |
| Cow position: | chr17:33288610-33288826 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 2-225 |
| Cow position: | chr17:38647108-38646892 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 2-233 |
| Cow position: | chr17:20990145-20990373 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 41, 169 |
| Conread position: | 2-235 |
| Cow position: | chr17:32950322-32950089 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 2-237 |
| Cow position: | chr17:23246255-23246026 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 3-151 |
| Cow position: | chr17:21325378-21325231 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 138, 43 |
| Conread position: | 8-212 |
| Cow position: | chr17:7142902-7142705 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 9-225 |
| Cow position: | chr17:42347184-42347393 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 12-225 |
| Cow position: | chr17:26881294-26881509 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 13-225 |
| Cow position: | chr17:24149220-24149005 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 34-204 |
| Cow position: | chr17:3467775-3467618 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 107, 10 |
| Conread position: | 34-225 |
| Cow position: | chr17:29292349-29292539 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 36, 139 |
| Conread position: | 36-225 |
| Cow position: | chr17:33999033-33999216 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 37-225 |
| Cow position: | chr17:20234242-20234055 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 41-212 |
| Cow position: | chr17:1568161-1568336 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 46-173 |
| Cow position: | chr17:6848809-6848681 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 46-225 |
| Cow position: | chr17:30665277-30665100 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 49-187 |
| Cow position: | chr17:31581485-31581346 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 74, 55 |
| Conread position: | 68-225 |
| Cow position: | chr17:24877125-24876966 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 72-225 |
| Cow position: | chr17:24773658-24773511 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 42 |
Show alignments to all cow chromosomes.