Cow genome map
| Conread name: | Pig2-110L12 |
| Conread position: | 2-128 |
| Cow position: | chr2:44222831-44222704 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-168 |
| Cow position: | chr2:45912625-45912793 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 2-179 |
| Cow position: | chr2:78249746-78249567 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 2-183 |
| Cow position: | chr2:30144725-30144552 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 2-202 |
| Cow position: | chr2:1762802-1762600 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 2-218 |
| Cow position: | chr2:44191487-44191273 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 67, 93 |
| Conread position: | 2-223 |
| Cow position: | chr2:53532805-53533017 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 2-225 |
| Cow position: | chr2:4254528-4254748 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 2-225 |
| Cow position: | chr2:9063281-9063058 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 2-225 |
| Cow position: | chr2:13684706-13684493 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 62, 94 |
| Conread position: | 2-225 |
| Cow position: | chr2:19287075-19287289 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 139, 61 |
| Conread position: | 2-225 |
| Cow position: | chr2:33554163-33554371 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 67, 95 |
| Conread position: | 2-225 |
| Cow position: | chr2:34695252-34695029 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 31, 180 |
| Conread position: | 2-225 |
| Cow position: | chr2:38628916-38628695 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 174 |
| Conread position: | 2-225 |
| Cow position: | chr2:42255442-42255221 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 2-225 |
| Cow position: | chr2:44065584-44065379 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 117, 32 |
| Conread position: | 2-225 |
| Cow position: | chr2:44170566-44170344 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 2-225 |
| Cow position: | chr2:45784744-45784519 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 2-225 |
| Cow position: | chr2:46189089-46189304 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 48 |
| Conread position: | 2-225 |
| Cow position: | chr2:51594772-51594553 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 2-225 |
| Cow position: | chr2:53650031-53649812 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 139, 67 |
| Conread position: | 2-225 |
| Cow position: | chr2:53851444-53851220 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 2-225 |
| Cow position: | chr2:64212549-64212774 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 2-225 |
| Cow position: | chr2:74260465-74260246 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 50, 29 |
| Conread position: | 2-225 |
| Cow position: | chr2:77467441-77467669 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 139, 61 |
| Conread position: | 2-226 |
| Cow position: | chr2:79951-80173 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 2-226 |
| Cow position: | chr2:68716661-68716883 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 3-194 |
| Cow position: | chr2:19328553-19328365 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 66, 155 |
| Conread position: | 3-224 |
| Cow position: | chr2:77157339-77157565 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 4-146 |
| Cow position: | chr2:47147913-47147772 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 4-179 |
| Cow position: | chr2:8354940-8355112 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 136, 32 |
| Conread position: | 4-214 |
| Cow position: | chr2:1638609-1638397 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 5-225 |
| Cow position: | chr2:13604473-13604253 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 5-225 |
| Cow position: | chr2:36077357-36077132 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 8-171 |
| Cow position: | chr2:28257467-28257299 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 8-225 |
| Cow position: | chr2:21355848-21356066 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 8-225 |
| Cow position: | chr2:46344692-46344476 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 9-212 |
| Cow position: | chr2:84983242-84983034 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 12-225 |
| Cow position: | chr2:21644452-21644665 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 12-225 |
| Cow position: | chr2:47361523-47361734 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 127, 19 |
| Conread position: | 12-225 |
| Cow position: | chr2:68970736-68970521 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 110, 29 |
| Conread position: | 24-214 |
| Cow position: | chr2:9324980-9324792 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 117, 17 |
| Conread position: | 26-189 |
| Cow position: | chr2:42309571-42309734 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 35-224 |
| Cow position: | chr2:82647841-82648031 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 147 |
| Conread position: | 53-225 |
| Cow position: | chr2:42599890-42599716 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 53-225 |
| Cow position: | chr2:51638514-51638335 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 63-225 |
| Cow position: | chr2:37072765-37072601 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 68-225 |
| Cow position: | chr2:14884226-14884072 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 76, 104 |
| Conread position: | 69-225 |
| Cow position: | chr2:1203626-1203469 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.