Cow genome map
| Conread name: | Pig2-110L12 |
| Conread position: | 1-225 |
| Cow position: | chr28:3914728-3914502 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 2-136 |
| Cow position: | chr28:11079319-11079185 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 2-159 |
| Cow position: | chr28:10863773-10863927 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 99 |
| Conread position: | 2-195 |
| Cow position: | chr28:2960820-2961009 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 83 |
| Conread position: | 2-212 |
| Cow position: | chr28:28164100-28163897 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 67, 137 |
| Conread position: | 2-217 |
| Cow position: | chr28:5128718-5128929 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 67 |
| Conread position: | 2-225 |
| Cow position: | chr28:4588111-4587889 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 67, 42 |
| Conread position: | 2-225 |
| Cow position: | chr28:7549047-7549270 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 67, 35 |
| Conread position: | 2-225 |
| Cow position: | chr28:8022091-8022318 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 121 |
| Conread position: | 2-225 |
| Cow position: | chr28:11585191-11585415 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 67, 171 |
| Conread position: | 2-225 |
| Cow position: | chr28:12430617-12430402 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 139, 42 |
| Conread position: | 2-225 |
| Cow position: | chr28:14649361-14649141 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 67, 16 |
| Conread position: | 2-225 |
| Cow position: | chr28:21868468-21868244 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 67, 51 |
| Conread position: | 2-225 |
| Cow position: | chr28:22346032-22345812 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 67, 77 |
| Conread position: | 2-235 |
| Cow position: | chr28:5817851-5817629 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 2-237 |
| Cow position: | chr28:8787551-8787325 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 2-265 |
| Cow position: | chr28:5204206-5203953 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 3-224 |
| Cow position: | chr28:16204324-16204539 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 3-225 |
| Cow position: | chr28:9636447-9636664 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 4-224 |
| Cow position: | chr28:3023904-3024118 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 4-224 |
| Cow position: | chr28:34082002-34082228 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 4-225 |
| Cow position: | chr28:7751291-7751508 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 5-224 |
| Cow position: | chr28:25056974-25056766 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 7-223 |
| Cow position: | chr28:26220264-26220056 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 62, 146 |
| Conread position: | 7-224 |
| Cow position: | chr28:10533926-10534137 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 8-203 |
| Cow position: | chr28:30937662-30937852 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 133, 55 |
| Conread position: | 12-173 |
| Cow position: | chr28:27428748-27428586 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 119 |
| Conread position: | 12-225 |
| Cow position: | chr28:34133863-34133656 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 27-224 |
| Cow position: | chr28:12758513-12758715 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 53-219 |
| Cow position: | chr28:25459491-25459324 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 103 |
Show alignments to all cow chromosomes.