Cow genome map

Conread name: Pig2-110L12

Conread position: 1-225
Cow position: chr3:23169080-23169306 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 84

Conread position: 2-164
Cow position: chr3:54782027-54782196 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 2-180
Cow position: chr3:74079654-74079834 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 2-211
Cow position: chr3:68881134-68881338 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 67, 38

Conread position: 2-225
Cow position: chr3:2396797-2397019 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 28

Conread position: 2-225
Cow position: chr3:7337800-7338010 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 139, 47

Conread position: 2-225
Cow position: chr3:10347336-10347119 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 66, 27

Conread position: 2-225
Cow position: chr3:10958258-10958465 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 67, 137

Conread position: 2-225
Cow position: chr3:17936857-17937075 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 67, 58

Conread position: 2-225
Cow position: chr3:29813227-29813007 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 67, 43

Conread position: 2-225
Cow position: chr3:39969881-39970108 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 67, 0

Conread position: 2-225
Cow position: chr3:50768661-50768442 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 38

Conread position: 2-225
Cow position: chr3:52608164-52607947 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 139, 67

Conread position: 2-225
Cow position: chr3:53150307-53150091 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 67, 46

Conread position: 2-225
Cow position: chr3:53790554-53790777 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 67, 17

Conread position: 2-225
Cow position: chr3:54946113-54945888 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 43

Conread position: 2-225
Cow position: chr3:55189772-55189987 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 67, 111

Conread position: 2-225
Cow position: chr3:56476664-56476446 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 75

Conread position: 2-225
Cow position: chr3:58968921-58969132 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 41

Conread position: 2-225
Cow position: chr3:59610736-59610960 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 153

Conread position: 2-225
Cow position: chr3:74409467-74409255 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 150

Conread position: 2-225
Cow position: chr3:74601096-74600881 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 140

Conread position: 2-225
Cow position: chr3:77496811-77496581 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 2-227
Cow position: chr3:11711947-11711715 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 26

Conread position: 2-227
Cow position: chr3:49327926-49327699 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 3-170
Cow position: chr3:22232669-22232837 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 33

Conread position: 3-215
Cow position: chr3:48363057-48362855 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 137, 28

Conread position: 3-225
Cow position: chr3:53221993-53221778 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 137, 28

Conread position: 3-225
Cow position: chr3:83474725-83474511 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 33

Conread position: 4-168
Cow position: chr3:61190944-61191107 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 58, 32

Conread position: 4-183
Cow position: chr3:22820552-22820370 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 5-225
Cow position: chr3:12705564-12705795 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 33, 49

Conread position: 7-225
Cow position: chr3:75479980-75479776 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 23

Conread position: 8-166
Cow position: chr3:34669751-34669909 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 60, 20

Conread position: 8-225
Cow position: chr3:49731663-49731874 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 38

Conread position: 12-177
Cow position: chr3:4082119-4082288 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 36

Conread position: 12-225
Cow position: chr3:74621017-74621233 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 10

Conread position: 12-235
Cow position: chr3:57754504-57754731 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 110, 29

Conread position: 15-210
Cow position: chr3:11063349-11063157 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 36, 58

Conread position: 25-221
Cow position: chr3:65969122-65968922 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 19

Conread position: 27-225
Cow position: chr3:54862453-54862658 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 160

Conread position: 36-166
Cow position: chr3:2630746-2630613 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 36-211
Cow position: chr3:56697896-56697717 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 13

Conread position: 41-225
Cow position: chr3:80581610-80581435 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 112

Conread position: 46-212
Cow position: chr3:26960649-26960818 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 55-205
Cow position: chr3:25945016-25944861 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.