Cow genome map
Conread name: | Pig2-110L12 |
Conread position: | 1-225 |
Cow position: | chr3:23169080-23169306 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 84 |
Conread position: | 2-164 |
Cow position: | chr3:54782027-54782196 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 2-180 |
Cow position: | chr3:74079654-74079834 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 139 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 2-211 |
Cow position: | chr3:68881134-68881338 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 165 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 67, 38 |
Conread position: | 2-225 |
Cow position: | chr3:2396797-2397019 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 28 |
Conread position: | 2-225 |
Cow position: | chr3:7337800-7338010 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 139, 47 |
Conread position: | 2-225 |
Cow position: | chr3:10347336-10347119 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 66, 27 |
Conread position: | 2-225 |
Cow position: | chr3:10958258-10958465 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 164 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 67, 137 |
Conread position: | 2-225 |
Cow position: | chr3:17936857-17937075 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 173 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 67, 58 |
Conread position: | 2-225 |
Cow position: | chr3:29813227-29813007 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 67, 43 |
Conread position: | 2-225 |
Cow position: | chr3:39969881-39970108 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 171 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 2-225 |
Cow position: | chr3:50768661-50768442 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 38 |
Conread position: | 2-225 |
Cow position: | chr3:52608164-52607947 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 171 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 139, 67 |
Conread position: | 2-225 |
Cow position: | chr3:53150307-53150091 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 174 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 67, 46 |
Conread position: | 2-225 |
Cow position: | chr3:53790554-53790777 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 169 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 67, 17 |
Conread position: | 2-225 |
Cow position: | chr3:54946113-54945888 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 43 |
Conread position: | 2-225 |
Cow position: | chr3:55189772-55189987 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 168 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 67, 111 |
Conread position: | 2-225 |
Cow position: | chr3:56476664-56476446 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 158 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 62, 75 |
Conread position: | 2-225 |
Cow position: | chr3:58968921-58969132 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 168 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 132, 41 |
Conread position: | 2-225 |
Cow position: | chr3:59610736-59610960 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 163 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 38, 153 |
Conread position: | 2-225 |
Cow position: | chr3:74409467-74409255 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 164 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 67, 150 |
Conread position: | 2-225 |
Cow position: | chr3:74601096-74600881 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 160 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 67, 140 |
Conread position: | 2-225 |
Cow position: | chr3:77496811-77496581 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 177 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 2-227 |
Cow position: | chr3:11711947-11711715 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 170 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 45, 26 |
Conread position: | 2-227 |
Cow position: | chr3:49327926-49327699 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 3-170 |
Cow position: | chr3:22232669-22232837 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 48, 33 |
Conread position: | 3-215 |
Cow position: | chr3:48363057-48362855 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 137, 28 |
Conread position: | 3-225 |
Cow position: | chr3:53221993-53221778 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 137, 28 |
Conread position: | 3-225 |
Cow position: | chr3:83474725-83474511 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 158 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 43, 33 |
Conread position: | 4-168 |
Cow position: | chr3:61190944-61191107 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 124 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 58, 32 |
Conread position: | 4-183 |
Cow position: | chr3:22820552-22820370 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 128 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 5-225 |
Cow position: | chr3:12705564-12705795 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 175 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 33, 49 |
Conread position: | 7-225 |
Cow position: | chr3:75479980-75479776 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 169 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 32, 23 |
Conread position: | 8-166 |
Cow position: | chr3:34669751-34669909 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 60, 20 |
Conread position: | 8-225 |
Cow position: | chr3:49731663-49731874 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 155 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 62, 38 |
Conread position: | 12-177 |
Cow position: | chr3:4082119-4082288 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 22, 36 |
Conread position: | 12-225 |
Cow position: | chr3:74621017-74621233 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 155 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 49, 10 |
Conread position: | 12-235 |
Cow position: | chr3:57754504-57754731 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 110, 29 |
Conread position: | 15-210 |
Cow position: | chr3:11063349-11063157 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 151 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 36, 58 |
Conread position: | 25-221 |
Cow position: | chr3:65969122-65968922 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 146 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 42, 19 |
Conread position: | 27-225 |
Cow position: | chr3:54862453-54862658 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 147 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 25, 160 |
Conread position: | 36-166 |
Cow position: | chr3:2630746-2630613 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 102 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 36-211 |
Cow position: | chr3:56697896-56697717 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 25, 13 |
Conread position: | 41-225 |
Cow position: | chr3:80581610-80581435 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 138 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 29, 112 |
Conread position: | 46-212 |
Cow position: | chr3:26960649-26960818 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 133 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 55-205 |
Cow position: | chr3:25945016-25944861 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.