Cow genome map
| Conread name: | Pig2-110L12 |
| Conread position: | 1-225 |
| Cow position: | chr9:45285513-45285289 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 2-133 |
| Cow position: | chr9:42509139-42509267 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 35 |
| Conread position: | 2-170 |
| Cow position: | chr9:30123942-30124111 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 2-180 |
| Cow position: | chr9:7634294-7634473 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 66, 158 |
| Conread position: | 2-183 |
| Cow position: | chr9:19067805-19067982 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 138, 66 |
| Conread position: | 2-188 |
| Cow position: | chr9:3738201-3738013 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 2-201 |
| Cow position: | chr9:48628051-48628250 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 48 |
| Conread position: | 2-203 |
| Cow position: | chr9:17799649-17799850 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 54, 149 |
| Conread position: | 2-204 |
| Cow position: | chr9:1938153-1938347 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 2-211 |
| Cow position: | chr9:5442012-5442224 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-223 |
| Cow position: | chr9:13169640-13169428 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 42 |
| Conread position: | 2-224 |
| Cow position: | chr9:20847952-20848177 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-225 |
| Cow position: | chr9:5219147-5218937 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 27 |
| Conread position: | 2-225 |
| Cow position: | chr9:21460131-21459915 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 2-225 |
| Cow position: | chr9:23388656-23388436 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 138, 176 |
| Conread position: | 2-225 |
| Cow position: | chr9:33119865-33119640 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 2-225 |
| Cow position: | chr9:34286822-34287036 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 120 |
| Conread position: | 2-225 |
| Cow position: | chr9:59013319-59013093 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 3-225 |
| Cow position: | chr9:26279145-26278931 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 7-168 |
| Cow position: | chr9:60027227-60027386 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 108 |
| Conread position: | 8-224 |
| Cow position: | chr9:55287863-55287650 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 8-225 |
| Cow position: | chr9:22152057-22151845 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 47, 134 |
| Conread position: | 9-188 |
| Cow position: | chr9:46235287-46235467 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 12-225 |
| Cow position: | chr9:35202910-35203126 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 22-225 |
| Cow position: | chr9:18073072-18072875 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 62, 54 |
| Conread position: | 25-225 |
| Cow position: | chr9:16182444-16182248 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 26-225 |
| Cow position: | chr9:19637594-19637396 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 27-237 |
| Cow position: | chr9:34310069-34310290 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 34-225 |
| Cow position: | chr9:42998414-42998229 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 34-225 |
| Cow position: | chr9:44108777-44108588 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 37-225 |
| Cow position: | chr9:20989399-20989212 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 10 |
| Conread position: | 44-179 |
| Cow position: | chr9:4341107-4340970 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 44-225 |
| Cow position: | chr9:767091-766908 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 46-180 |
| Cow position: | chr9:40542185-40542320 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 49-225 |
| Cow position: | chr9:37069502-37069327 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 52-225 |
| Cow position: | chr9:55084227-55084055 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 17, 128 |
| Conread position: | 63-225 |
| Cow position: | chr9:32812427-32812590 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 78, 104 |
Show alignments to all cow chromosomes.