Cow genome map
| Conread name: | Pig2-31G11 |
| Conread position: | 2-369 |
| Cow position: | chr1:7452751-7452375 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 75, 23 |
| Conread position: | 4-215 |
| Cow position: | chr1:35000170-35000390 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 103 |
| Conread position: | 4-227 |
| Cow position: | chr1:97472825-97473069 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 202 |
| Conread position: | 4-257 |
| Cow position: | chr1:58146185-58146462 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 230 |
| Conread position: | 4-275 |
| Cow position: | chr1:29888609-29888901 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 140 |
| Conread position: | 4-336 |
| Cow position: | chr1:87115167-87114812 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 38, 119 |
| Conread position: | 4-355 |
| Cow position: | chr1:14026161-14025789 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 117 |
| Conread position: | 4-355 |
| Cow position: | chr1:95305165-95305534 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 264 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-357 |
| Cow position: | chr1:67603758-67604127 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 272 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 41, 207 |
| Conread position: | 40-365 |
| Cow position: | chr1:3327576-3327918 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 168 |
| Conread position: | 42-263 |
| Cow position: | chr1:98426105-98425873 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 183 |
| Conread position: | 42-269 |
| Cow position: | chr1:83643032-83643268 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 42-275 |
| Cow position: | chr1:92072412-92072640 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 91, 40 |
| Conread position: | 42-355 |
| Cow position: | chr1:101623267-101622946 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 42-369 |
| Cow position: | chr1:71242291-71242623 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 59-367 |
| Cow position: | chr1:68929374-68929062 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 80-290 |
| Cow position: | chr1:3330763-3330546 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 87-205 |
| Cow position: | chr1:58142979-58143099 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-209 |
| Cow position: | chr1:78562115-78561991 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 87-251 |
| Cow position: | chr1:61607503-61607340 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-257 |
| Cow position: | chr1:33391069-33390899 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 87-257 |
| Cow position: | chr1:90971004-90970834 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-257 |
| Cow position: | chr1:94534764-94534934 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 87-264 |
| Cow position: | chr1:30069434-30069255 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 87-275 |
| Cow position: | chr1:36075050-36075243 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-334 |
| Cow position: | chr1:35429799-35429559 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 87-355 |
| Cow position: | chr1:2758533-2758271 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-369 |
| Cow position: | chr1:80172590-80172310 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-369 |
| Cow position: | chr1:90041720-90042002 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 89-349 |
| Cow position: | chr1:13695304-13695046 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 98-355 |
| Cow position: | chr1:49051517-49051779 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 39, 135 |
| Conread position: | 99-355 |
| Cow position: | chr1:102411103-102410846 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 44, 116 |
| Conread position: | 106-369 |
| Cow position: | chr1:1923803-1924068 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 26, 112 |
| Conread position: | 119-356 |
| Cow position: | chr1:27939849-27939611 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 88 |
| Conread position: | 119-356 |
| Cow position: | chr1:98409541-98409302 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 119-369 |
| Cow position: | chr1:26910991-26910742 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 160-369 |
| Cow position: | chr1:16538328-16538531 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 55 |
Show alignments to all cow chromosomes.