Cow genome map
| Conread name: | Pig2-31G11 |
| Conread position: | 2-369 |
| Cow position: | chr11:8100334-8100706 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 116 |
| Conread position: | 4-257 |
| Cow position: | chr11:34680052-34679800 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 4-336 |
| Cow position: | chr11:10135047-10135396 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 255 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 37, 131 |
| Conread position: | 4-357 |
| Cow position: | chr11:12337062-12336685 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 272 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 44, 119 |
| Conread position: | 4-369 |
| Cow position: | chr11:62186722-62187091 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 198 |
| Conread position: | 4-369 |
| Cow position: | chr11:63668408-63668789 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 118 |
| Conread position: | 13-368 |
| Cow position: | chr11:37331875-37331531 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 17-265 |
| Cow position: | chr11:1045070-1045338 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 100 |
| Conread position: | 40-343 |
| Cow position: | chr11:62649283-62648976 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 40-361 |
| Cow position: | chr11:12369653-12369335 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 16 |
| Conread position: | 40-366 |
| Cow position: | chr11:2609948-2610260 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 40-369 |
| Cow position: | chr11:4660546-4660887 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 138 |
| Conread position: | 42-257 |
| Cow position: | chr11:65720258-65720034 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 42-329 |
| Cow position: | chr11:2536516-2536795 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 32 |
| Conread position: | 42-339 |
| Cow position: | chr11:37710250-37709928 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 38, 183 |
| Conread position: | 45-359 |
| Cow position: | chr11:82532006-82532334 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 78-357 |
| Cow position: | chr11:35943076-35942802 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 87-199 |
| Cow position: | chr11:81719344-81719459 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 87-215 |
| Cow position: | chr11:19665483-19665355 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-257 |
| Cow position: | chr11:13056169-13056337 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 87-257 |
| Cow position: | chr11:61183123-61182953 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-262 |
| Cow position: | chr11:23051292-23051469 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 87-276 |
| Cow position: | chr11:24964189-24964001 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-355 |
| Cow position: | chr11:30129899-30130169 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 87-355 |
| Cow position: | chr11:38109112-38109374 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 87-359 |
| Cow position: | chr11:49608213-49608460 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 87-369 |
| Cow position: | chr11:63674832-63675112 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 89-247 |
| Cow position: | chr11:78471780-78471937 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 89-355 |
| Cow position: | chr11:41534923-41535188 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 108 |
| Conread position: | 90-356 |
| Cow position: | chr11:21797527-21797260 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 91-356 |
| Cow position: | chr11:4158681-4158423 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 41, 5 |
| Conread position: | 92-356 |
| Cow position: | chr11:19684728-19684993 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 40, 125 |
| Conread position: | 95-355 |
| Cow position: | chr11:9348966-9348709 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 99-350 |
| Cow position: | chr11:41700499-41700247 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 137, 32 |
| Conread position: | 103-355 |
| Cow position: | chr11:66492028-66492280 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 106-247 |
| Cow position: | chr11:16295731-16295872 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 115 |
| Conread position: | 110-369 |
| Cow position: | chr11:36261212-36260951 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 119-355 |
| Cow position: | chr11:35367339-35367573 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 99 |
Show alignments to all cow chromosomes.