Cow genome map
| Conread name: | Pig2-31G11 |
| Conread position: | 2-355 |
| Cow position: | chr18:54137230-54137599 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 46, 230 |
| Conread position: | 4-202 |
| Cow position: | chr18:16359912-16359696 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 146 |
| Conread position: | 4-262 |
| Cow position: | chr18:29641567-29641287 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 38, 200 |
| Conread position: | 4-356 |
| Cow position: | chr18:44075458-44075084 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 118 |
| Conread position: | 4-369 |
| Cow position: | chr18:53967594-53967206 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 116 |
| Conread position: | 7-368 |
| Cow position: | chr18:9188849-9188474 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 7-368 |
| Cow position: | chr18:53533960-53533585 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 223 |
| Conread position: | 40-342 |
| Cow position: | chr18:49886042-49886355 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 164 |
| Conread position: | 42-257 |
| Cow position: | chr18:3506341-3506116 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 42-257 |
| Cow position: | chr18:55512239-55512465 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 69 |
| Conread position: | 42-335 |
| Cow position: | chr18:46092979-46092688 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 42-369 |
| Cow position: | chr18:4769796-4770138 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 38, 68 |
| Conread position: | 42-369 |
| Cow position: | chr18:8339771-8339444 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 43, 185 |
| Conread position: | 87-247 |
| Cow position: | chr18:1783349-1783192 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 87-251 |
| Cow position: | chr18:34766668-34766827 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 87-257 |
| Cow position: | chr18:1095111-1095280 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-264 |
| Cow position: | chr18:50054879-50055057 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 87-330 |
| Cow position: | chr18:46094039-46093794 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 87-355 |
| Cow position: | chr18:28100532-28100267 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-369 |
| Cow position: | chr18:42287651-42287930 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 88-343 |
| Cow position: | chr18:8270592-8270337 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 89-200 |
| Cow position: | chr18:17308111-17308223 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 89-328 |
| Cow position: | chr18:32858259-32858033 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 43, 108 |
| Conread position: | 95-369 |
| Cow position: | chr18:53804640-53804369 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 123 |
| Conread position: | 105-357 |
| Cow position: | chr18:13728738-13728986 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 107-369 |
| Cow position: | chr18:16405195-16404931 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 114-369 |
| Cow position: | chr18:15808428-15808176 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 119-369 |
| Cow position: | chr18:42818766-42819021 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 142-356 |
| Cow position: | chr18:44527902-44528120 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 74 |
Show alignments to all cow chromosomes.