Cow genome map
| Conread name: | Pig2-31G11 |
| Conread position: | 4-356 |
| Cow position: | chr29:10289379-10289748 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 4-368 |
| Cow position: | chr29:5224719-5224338 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 118 |
| Conread position: | 4-369 |
| Cow position: | chr29:19651721-19651339 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 228 |
| Conread position: | 34-206 |
| Cow position: | chr29:565438-565612 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 40-343 |
| Cow position: | chr29:11282945-11282635 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 42-244 |
| Cow position: | chr29:25914609-25914822 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 35, 69 |
| Conread position: | 42-368 |
| Cow position: | chr29:31843366-31843700 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 42-369 |
| Cow position: | chr29:13501685-13501352 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 50-275 |
| Cow position: | chr29:33648777-33648540 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 72-231 |
| Cow position: | chr29:3104202-3104041 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 72-231 |
| Cow position: | chr29:3143745-3143584 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 87-246 |
| Cow position: | chr29:8790392-8790545 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 87-247 |
| Cow position: | chr29:3550661-3550502 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-257 |
| Cow position: | chr29:31650097-31649926 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-328 |
| Cow position: | chr29:4242565-4242326 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 87-353 |
| Cow position: | chr29:22784769-22784498 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-361 |
| Cow position: | chr29:30241758-30241485 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 131 |
| Conread position: | 87-361 |
| Cow position: | chr29:37071698-37071424 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-369 |
| Cow position: | chr29:19662699-19662426 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 97-275 |
| Cow position: | chr29:24045181-24045357 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 97-336 |
| Cow position: | chr29:349435-349674 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 104 |
| Conread position: | 98-215 |
| Cow position: | chr29:28983037-28983157 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 17, 104 |
| Conread position: | 99-359 |
| Cow position: | chr29:30207955-30208214 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 95 |
| Conread position: | 106-252 |
| Cow position: | chr29:40057567-40057714 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 107-311 |
| Cow position: | chr29:10662328-10662125 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 148-355 |
| Cow position: | chr29:36176035-36175832 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 135, 17 |
| Conread position: | 158-281 |
| Cow position: | chr29:4769586-4769706 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.