Cow genome map
| Conread name: | Pig2-31G11 |
| Conread position: | 2-355 |
| Cow position: | chr3:5164043-5163679 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 209 |
| Conread position: | 2-356 |
| Cow position: | chr3:67818182-67817807 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 4-205 |
| Cow position: | chr3:5449142-5449361 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 112 |
| Conread position: | 4-227 |
| Cow position: | chr3:67459971-67460210 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 113 |
| Conread position: | 4-229 |
| Cow position: | chr3:7851624-7851864 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 42, 226 |
| Conread position: | 4-234 |
| Cow position: | chr3:34890245-34890494 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 175 |
| Conread position: | 4-368 |
| Cow position: | chr3:36005389-36005771 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 115 |
| Conread position: | 4-369 |
| Cow position: | chr3:7827672-7827289 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 38, 231 |
| Conread position: | 4-369 |
| Cow position: | chr3:30383592-30383203 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 119 |
| Conread position: | 40-215 |
| Cow position: | chr3:34227917-34228104 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 42-257 |
| Cow position: | chr3:34210925-34211144 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 67 |
| Conread position: | 42-267 |
| Cow position: | chr3:23088133-23088366 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 181 |
| Conread position: | 42-343 |
| Cow position: | chr3:2672572-2672885 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 129 |
| Conread position: | 42-355 |
| Cow position: | chr3:25576688-25576365 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 68 |
| Conread position: | 44-277 |
| Cow position: | chr3:42315839-42316077 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 44-369 |
| Cow position: | chr3:12769551-12769216 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 48-349 |
| Cow position: | chr3:52399864-52399568 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 78-355 |
| Cow position: | chr3:3400328-3400610 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 11, 121 |
| Conread position: | 83-350 |
| Cow position: | chr3:27559376-27559108 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 84-198 |
| Cow position: | chr3:7838330-7838214 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 84-262 |
| Cow position: | chr3:72580781-72580602 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 108 |
| Conread position: | 87-200 |
| Cow position: | chr3:523960-524076 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 87-251 |
| Cow position: | chr3:41038323-41038159 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-257 |
| Cow position: | chr3:5427454-5427285 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-257 |
| Cow position: | chr3:61213132-61212962 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-265 |
| Cow position: | chr3:7775624-7775452 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-300 |
| Cow position: | chr3:21714283-21714067 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-354 |
| Cow position: | chr3:74798475-74798753 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-361 |
| Cow position: | chr3:24413552-24413286 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-369 |
| Cow position: | chr3:313188-312911 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-369 |
| Cow position: | chr3:7820856-7820581 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-369 |
| Cow position: | chr3:61964352-61964086 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 88-319 |
| Cow position: | chr3:23430049-23430277 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 91-202 |
| Cow position: | chr3:75272708-75272821 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 106 |
| Conread position: | 91-369 |
| Cow position: | chr3:29307150-29306884 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 190, 31 |
| Conread position: | 106-369 |
| Cow position: | chr3:5158152-5157884 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 23, 112 |
| Conread position: | 117-306 |
| Cow position: | chr3:38305996-38306186 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 119-369 |
| Cow position: | chr3:2657252-2657001 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 137-369 |
| Cow position: | chr3:25262320-25262090 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 63 |
Show alignments to all cow chromosomes.