Cow genome map
| Conread name: | Pig2-31G11 |
| Conread position: | 2-247 |
| Cow position: | chr5:47438835-47438570 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 46, 118 |
| Conread position: | 2-295 |
| Cow position: | chr5:44113821-44113520 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 40, 191 |
| Conread position: | 4-175 |
| Cow position: | chr5:40731581-40731767 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 4-198 |
| Cow position: | chr5:2023916-2023703 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 4-355 |
| Cow position: | chr5:11670927-11671289 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 29, 197 |
| Conread position: | 5-213 |
| Cow position: | chr5:62033061-62032828 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 40-361 |
| Cow position: | chr5:10037882-10038217 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 40-369 |
| Cow position: | chr5:43094672-43095013 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 41-193 |
| Cow position: | chr5:60196635-60196789 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 42-201 |
| Cow position: | chr5:12276401-12276231 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 42-355 |
| Cow position: | chr5:44648485-44648160 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 83-366 |
| Cow position: | chr5:38590564-38590288 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 87-196 |
| Cow position: | chr5:45694710-45694822 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-228 |
| Cow position: | chr5:67479450-67479591 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 87-247 |
| Cow position: | chr5:52001725-52001883 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 87-251 |
| Cow position: | chr5:34964380-34964538 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 87-257 |
| Cow position: | chr5:55193867-55194036 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 87-281 |
| Cow position: | chr5:16368306-16368100 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 87-301 |
| Cow position: | chr5:47961596-47961379 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-355 |
| Cow position: | chr5:5918782-5918510 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 87-357 |
| Cow position: | chr5:34502859-34503123 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 87-368 |
| Cow position: | chr5:75451063-75451346 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 87-369 |
| Cow position: | chr5:2216822-2217098 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 127 |
| Conread position: | 87-369 |
| Cow position: | chr5:15754428-15754713 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 87-369 |
| Cow position: | chr5:52404143-52404437 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 127 |
| Conread position: | 87-369 |
| Cow position: | chr5:65206518-65206795 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 87-369 |
| Cow position: | chr5:68086887-68087168 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 87-369 |
| Cow position: | chr5:69711269-69711551 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 99-368 |
| Cow position: | chr5:12550365-12550634 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 119 |
| Conread position: | 106-324 |
| Cow position: | chr5:60215990-60216209 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 117-351 |
| Cow position: | chr5:56810913-56810676 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 119-336 |
| Cow position: | chr5:58350254-58350475 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 7, 93 |
| Conread position: | 119-354 |
| Cow position: | chr5:7797106-7796873 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 78 |
Show alignments to all cow chromosomes.