• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Pig3-SRG8014G04
        

               
Conread position:
               
215-553
               

               
Cow position:
               
chr14:12614031-12613716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 154
               

               
Conread position:
               
216-398
               

               
Cow position:
               
chr14:1978006-1977829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
216-570
               

               
Cow position:
               
chr14:8101857-8102199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
216-623
               

               
Cow position:
               
chr14:6419239-6418835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
216-623
               

               
Cow position:
               
chr14:22381486-22381079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
216-625
               

               
Cow position:
               
chr14:41479595-41479182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
217-389
               

               
Cow position:
               
chr14:28803675-28803498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
217-452
               

               
Cow position:
               
chr14:14187399-14187637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
217-490
               

               
Cow position:
               
chr14:46178058-46178337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
217-529
               

               
Cow position:
               
chr14:20712623-20712301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
221-608
               

               
Cow position:
               
chr14:19863362-19862981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
222-584
               

               
Cow position:
               
chr14:43453106-43452741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
223-454
               

               
Cow position:
               
chr14:4109400-4109167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 165
               

               
Conread position:
               
223-625
               

               
Cow position:
               
chr14:12244309-12243911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
223-625
               

               
Cow position:
               
chr14:28378433-28378838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 139
               

               
Conread position:
               
224-591
               

               
Cow position:
               
chr14:12250123-12249758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
224-621
               

               
Cow position:
               
chr14:34907371-34906971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
225-438
               

               
Cow position:
               
chr14:4227130-4226905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
226-455
               

               
Cow position:
               
chr14:35018675-35018449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
226-459
               

               
Cow position:
               
chr14:23712768-23712997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
226-478
               

               
Cow position:
               
chr14:5835985-5836234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
192, 28
               

               
Conread position:
               
226-618
               

               
Cow position:
               
chr14:25779173-25779571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
226-619
               

               
Cow position:
               
chr14:24581007-24581409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 16
               

               
Conread position:
               
226-623
               

               
Cow position:
               
chr14:38921027-38921392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
226-624
               

               
Cow position:
               
chr14:13473592-13473984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
226-624
               

               
Cow position:
               
chr14:25403858-25403471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
226-625
               

               
Cow position:
               
chr14:20600462-20600863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
227-381
               

               
Cow position:
               
chr14:28924462-28924618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
227-456
               

               
Cow position:
               
chr14:33714600-33714380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
227-496
               

               
Cow position:
               
chr14:43035961-43036221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
228-455
               

               
Cow position:
               
chr14:14466394-14466172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
215, 74
               

               
Conread position:
               
228-456
               

               
Cow position:
               
chr14:38379100-38379328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
230-623
               

               
Cow position:
               
chr14:20666939-20666546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 187
               

               
Conread position:
               
231-468
               

               
Cow position:
               
chr14:40183126-40183364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
231-622
               

               
Cow position:
               
chr14:18941215-18940837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
232-623
               

               
Cow position:
               
chr14:33462247-33462630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
235-382
               

               
Cow position:
               
chr14:25986607-25986753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 7
               

               
Conread position:
               
239-435
               

               
Cow position:
               
chr14:24786035-24786219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
240-372
               

               
Cow position:
               
chr14:20826570-20826696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
240-391
               

               
Cow position:
               
chr14:27919643-27919495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
240-405
               

               
Cow position:
               
chr14:28004071-28004237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
240-619
               

               
Cow position:
               
chr14:36555063-36554687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 186
               

               
Conread position:
               
241-454
               

               
Cow position:
               
chr14:36709216-36709428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
241-491
               

               
Cow position:
               
chr14:31888606-31888369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
241-624
               

               
Cow position:
               
chr14:44237610-44237224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
241-625
               

               
Cow position:
               
chr14:46074678-46075062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 184
               

               
Conread position:
               
242-340
               

               
Cow position:
               
chr14:15492693-15492791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
242-356
               

               
Cow position:
               
chr14:41966339-41966451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
242-360
               

               
Cow position:
               
chr14:19394456-19394574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
242-384
               

               
Cow position:
               
chr14:22952897-22952762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
242-387
               

               
Cow position:
               
chr14:20301915-20301768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
242-393
               

               
Cow position:
               
chr14:3867259-3867411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-393
               

               
Cow position:
               
chr14:30453728-30453577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
242-393
               

               
Cow position:
               
chr14:43416194-43416042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-398
               

               
Cow position:
               
chr14:11846592-11846751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 108
               

               
Conread position:
               
242-398
               

               
Cow position:
               
chr14:39037331-39037479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
242-401
               

               
Cow position:
               
chr14:8750172-8750328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
153, 103
               

               
Conread position:
               
242-405
               

               
Cow position:
               
chr14:33309410-33309252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
242-408
               

               
Cow position:
               
chr14:28115089-28114923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
242-417
               

               
Cow position:
               
chr14:38338048-38337874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
242-428
               

               
Cow position:
               
chr14:19129606-19129791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
242-437
               

               
Cow position:
               
chr14:8006230-8006049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
242-446
               

               
Cow position:
               
chr14:11820026-11819826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
242-446
               

               
Cow position:
               
chr14:48740774-48740588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
242-447
               

               
Cow position:
               
chr14:37131752-37131957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
242-451
               

               
Cow position:
               
chr14:5630258-5630466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
190, 93
               

               
Conread position:
               
242-452
               

               
Cow position:
               
chr14:7482152-7482359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
242-452
               

               
Cow position:
               
chr14:15032854-15033060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
8, 93
               

               
Conread position:
               
242-452
               

               
Cow position:
               
chr14:41127991-41128194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
242-458
               

               
Cow position:
               
chr14:3564378-3564583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
184, 55
               

               
Conread position:
               
242-458
               

               
Cow position:
               
chr14:33791283-33791499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
242-462
               

               
Cow position:
               
chr14:33205042-33204820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-469
               

               
Cow position:
               
chr14:22966849-22967072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
242-498
               

               
Cow position:
               
chr14:7290895-7291141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
118, 53
               

               
Conread position:
               
242-499
               

               
Cow position:
               
chr14:48950721-48950979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-508
               

               
Cow position:
               
chr14:39770136-39769863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 181
               

               
Conread position:
               
242-508
               

               
Cow position:
               
chr14:48427170-48427436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
242-528
               

               
Cow position:
               
chr14:20468011-20467733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 123
               

               
Conread position:
               
242-534
               

               
Cow position:
               
chr14:33828257-33828530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
65, 92
               

               
Conread position:
               
242-542
               

               
Cow position:
               
chr14:40201678-40201383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
242-546
               

               
Cow position:
               
chr14:45923502-45923197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-549
               

               
Cow position:
               
chr14:42154867-42154561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 0
               

               
Conread position:
               
242-579
               

               
Cow position:
               
chr14:29771867-29772200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
242-581
               

               
Cow position:
               
chr14:27591857-27591516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
242-587
               

               
Cow position:
               
chr14:41210952-41211308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 21
               

               
Conread position:
               
242-590
               

               
Cow position:
               
chr14:40253317-40253656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
242-616
               

               
Cow position:
               
chr14:50589287-50588933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
242-618
               

               
Cow position:
               
chr14:24991919-24992282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
242-619
               

               
Cow position:
               
chr14:23253532-23253906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
242-620
               

               
Cow position:
               
chr14:8784281-8784647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
242-621
               

               
Cow position:
               
chr14:26442243-26441853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
242-621
               

               
Cow position:
               
chr14:27848297-27848672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
242-622
               

               
Cow position:
               
chr14:8754425-8754801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 88
               

               
Conread position:
               
242-622
               

               
Cow position:
               
chr14:15054892-15054521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
242-622
               

               
Cow position:
               
chr14:27312523-27312912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
242-622
               

               
Cow position:
               
chr14:45967443-45967061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-623
               

               
Cow position:
               
chr14:41325340-41324965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 69
               

               
Conread position:
               
242-623
               

               
Cow position:
               
chr14:41749664-41749298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
242-623
               

               
Cow position:
               
chr14:43046245-43046622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 83
               

               
Conread position:
               
242-623
               

               
Cow position:
               
chr14:47584559-47584174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
242-624
               

               
Cow position:
               
chr14:38296184-38295816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
242-624
               

               
Cow position:
               
chr14:46735401-46735792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 270
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:1727971-1727587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:5502065-5501675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 313
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:8985499-8985115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:9875490-9875862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:10711352-10710968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 154
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:13810034-13810440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:14764788-14764404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:19533267-19533652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:20454723-20455107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:21964215-21964593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 113
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:24896497-24896112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:28102825-28103191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
64, 169
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:32583209-32583593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 154
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:38436839-38436459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 233
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:39434163-39433804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:47870989-47871373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
242-625
               

               
Cow position:
               
chr14:50140115-50140493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 60
               

               
Conread position:
               
243-356
               

               
Cow position:
               
chr14:16256866-16256977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
243-366
               

               
Cow position:
               
chr14:24608064-24608187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 101
               

               
Conread position:
               
243-406
               

               
Cow position:
               
chr14:1646094-1645931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
243-418
               

               
Cow position:
               
chr14:19372439-19372613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
243-427
               

               
Cow position:
               
chr14:28097962-28098129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
243-459
               

               
Cow position:
               
chr14:27305250-27305467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
243-471
               

               
Cow position:
               
chr14:26880709-26880483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
243-498
               

               
Cow position:
               
chr14:40433018-40433272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
249, 91
               

               
Conread position:
               
243-595
               

               
Cow position:
               
chr14:9743886-9744238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
243-602
               

               
Cow position:
               
chr14:22989132-22989488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
243-623
               

               
Cow position:
               
chr14:12546488-12546114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 57
               

               
Conread position:
               
243-623
               

               
Cow position:
               
chr14:20640529-20640146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
243-625
               

               
Cow position:
               
chr14:38865383-38865768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
243-625
               

               
Cow position:
               
chr14:44368498-44368115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
244-392
               

               
Cow position:
               
chr14:13042855-13043005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
244-393
               

               
Cow position:
               
chr14:1663261-1663112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 104
               

               
Conread position:
               
244-625
               

               
Cow position:
               
chr14:30580643-30581023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
244-625
               

               
Cow position:
               
chr14:34345443-34345824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 302
               

               
Conread position:
               
245-370
               

               
Cow position:
               
chr14:16033108-16033232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
245-406
               

               
Cow position:
               
chr14:20384885-20384723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
245-406
               

               
Cow position:
               
chr14:24387548-24387709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-427
               

               
Cow position:
               
chr14:17841189-17841008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
245-429
               

               
Cow position:
               
chr14:37884313-37884130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
245-436
               

               
Cow position:
               
chr14:23464716-23464527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
245-450
               

               
Cow position:
               
chr14:15913448-15913252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
245-452
               

               
Cow position:
               
chr14:14280512-14280721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr14:11641470-11641247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
245-512
               

               
Cow position:
               
chr14:41809556-41809288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
245-567
               

               
Cow position:
               
chr14:21284723-21285041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 181
               

               
Conread position:
               
245-619
               

               
Cow position:
               
chr14:17094556-17094181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
245-623
               

               
Cow position:
               
chr14:34199749-34199358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
245-623
               

               
Cow position:
               
chr14:45605191-45605572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 100
               

               
Conread position:
               
245-623
               

               
Cow position:
               
chr14:50027320-50027685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
245-624
               

               
Cow position:
               
chr14:17755660-17756035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
245-625
               

               
Cow position:
               
chr14:30592439-30592816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 229
               

               
Conread position:
               
245-625
               

               
Cow position:
               
chr14:41471872-41471491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
246-413
               

               
Cow position:
               
chr14:24840075-24839913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
246-507
               

               
Cow position:
               
chr14:17013605-17013867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 115
               

               
Conread position:
               
246-543
               

               
Cow position:
               
chr14:20016604-20016313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
247-380
               

               
Cow position:
               
chr14:26490641-26490512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
247-384
               

               
Cow position:
               
chr14:14949111-14948974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
247-384
               

               
Cow position:
               
chr14:26191000-26190860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
247-398
               

               
Cow position:
               
chr14:12667831-12667982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
247-441
               

               
Cow position:
               
chr14:24922203-24922399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
247-459
               

               
Cow position:
               
chr14:44878685-44878475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
247-460
               

               
Cow position:
               
chr14:5222187-5221975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
247-559
               

               
Cow position:
               
chr14:3878555-3878861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
247-602
               

               
Cow position:
               
chr14:20010207-20009865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 82
               

               
Conread position:
               
247-619
               

               
Cow position:
               
chr14:44742283-44741915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
247-623
               

               
Cow position:
               
chr14:40230537-40230163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
247-624
               

               
Cow position:
               
chr14:6599851-6599476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
247-624
               

               
Cow position:
               
chr14:31734750-31734380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
248-451
               

               
Cow position:
               
chr14:34330647-34330842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
249-389
               

               
Cow position:
               
chr14:20110619-20110479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-440
               

               
Cow position:
               
chr14:47385748-47385927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
250-443
               

               
Cow position:
               
chr14:10858536-10858726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 96
               

               
Conread position:
               
250-624
               

               
Cow position:
               
chr14:18904507-18904127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 304
               

               
Conread position:
               
251-471
               

               
Cow position:
               
chr14:24236929-24237141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
251-506
               

               
Cow position:
               
chr14:18345628-18345375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 161
               

               
Conread position:
               
252-429
               

               
Cow position:
               
chr14:6234162-6233982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
252-458
               

               
Cow position:
               
chr14:48412773-48412567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-623
               

               
Cow position:
               
chr14:12484193-12483838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 58
               

               
Conread position:
               
252-624
               

               
Cow position:
               
chr14:6490599-6490230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
253-618
               

               
Cow position:
               
chr14:9020135-9020498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
253-620
               

               
Cow position:
               
chr14:42918197-42918576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 92
               

               
Conread position:
               
253-624
               

               
Cow position:
               
chr14:33538815-33538452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
254-517
               

               
Cow position:
               
chr14:34083044-34082790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
254-625
               

               
Cow position:
               
chr14:41756368-41756734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
255-625
               

               
Cow position:
               
chr14:21201729-21201351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
256-427
               

               
Cow position:
               
chr14:29632775-29632604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
258-374
               

               
Cow position:
               
chr14:14580979-14581094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
258-421
               

               
Cow position:
               
chr14:47036684-47036527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
258-449
               

               
Cow position:
               
chr14:32452365-32452562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
258-480
               

               
Cow position:
               
chr14:37934503-37934278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
258-600
               

               
Cow position:
               
chr14:9029564-9029233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 39
               

               
Conread position:
               
260-412
               

               
Cow position:
               
chr14:13846102-13846250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
260-529
               

               
Cow position:
               
chr14:33247319-33247045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
260-536
               

               
Cow position:
               
chr14:34020801-34021073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 194
               

               
Conread position:
               
262-498
               

               
Cow position:
               
chr14:30926819-30927043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
165, 104
               

               
Conread position:
               
264-539
               

               
Cow position:
               
chr14:42330470-42330743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 0
               

               
Conread position:
               
264-563
               

               
Cow position:
               
chr14:38168801-38169091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 54
               

               
Conread position:
               
265-427
               

               
Cow position:
               
chr14:17397484-17397326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
266-602
               

               
Cow position:
               
chr14:34096470-34096142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 67
               

               
Conread position:
               
267-623
               

               
Cow position:
               
chr14:21534913-21534572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
270-621
               

               
Cow position:
               
chr14:36775730-36776076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 63
               

               
Conread position:
               
274-456
               

               
Cow position:
               
chr14:45677353-45677531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
27, 0
               
Show alignments to all cow chromosomes.