Cow genome map

Conread name: Pig3-SRG8014G04

Conread position: 203-471
Cow position: chr26:32058654-32058390 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 37, 0

Conread position: 215-623
Cow position: chr26:613683-614111 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 306
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 109

Conread position: 217-405
Cow position: chr26:8310699-8310511 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 48

Conread position: 224-623
Cow position: chr26:21351674-21351282 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 82

Conread position: 225-568
Cow position: chr26:32553662-32553321 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 99

Conread position: 226-404
Cow position: chr26:20448946-20448775 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 95

Conread position: 226-624
Cow position: chr26:34108742-34108348 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 99

Conread position: 227-448
Cow position: chr26:1365984-1365762 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 191

Conread position: 228-389
Cow position: chr26:27761673-27761830 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 15

Conread position: 231-327
Cow position: chr26:10747654-10747749 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 235-444
Cow position: chr26:17204173-17204374 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 168, 28

Conread position: 239-436
Cow position: chr26:10652375-10652181 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 67, 156

Conread position: 240-384
Cow position: chr26:16179528-16179383 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 240-393
Cow position: chr26:12821240-12821084 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 240-431
Cow position: chr26:30254663-30254857 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 240-442
Cow position: chr26:6794113-6793906 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 63, 10

Conread position: 240-447
Cow position: chr26:6793907-6793702 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 61, 94

Conread position: 240-459
Cow position: chr26:9104315-9104532 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 67, 96

Conread position: 240-480
Cow position: chr26:1329508-1329272 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 62

Conread position: 240-615
Cow position: chr26:8700083-8700458 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 46

Conread position: 241-625
Cow position: chr26:2389088-2389482 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 38

Conread position: 242-362
Cow position: chr26:23582984-23583104 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 242-364
Cow position: chr26:16721827-16721707 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 102, 33

Conread position: 242-375
Cow position: chr26:15373075-15373209 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 242-382
Cow position: chr26:22249515-22249656 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 242-393
Cow position: chr26:6252814-6252662 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 242-398
Cow position: chr26:17148666-17148510 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 132
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 242-416
Cow position: chr26:31605368-31605199 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 118, 0

Conread position: 242-429
Cow position: chr26:20013440-20013255 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 167, 103

Conread position: 242-439
Cow position: chr26:19774339-19774534 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 88

Conread position: 242-444
Cow position: chr26:25300605-25300808 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 242-458
Cow position: chr26:8811092-8810882 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 242-458
Cow position: chr26:10767949-10768151 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 206, 100

Conread position: 242-458
Cow position: chr26:32865927-32866141 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 149, 68

Conread position: 242-467
Cow position: chr26:32026404-32026619 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 65, 133

Conread position: 242-496
Cow position: chr26:16549947-16549695 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 229

Conread position: 242-499
Cow position: chr26:6188256-6188005 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 242-508
Cow position: chr26:25737436-25737171 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 242-508
Cow position: chr26:27491539-27491802 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 242-520
Cow position: chr26:18231329-18231057 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 55, 85

Conread position: 242-528
Cow position: chr26:6794856-6795139 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 64, 88

Conread position: 242-535
Cow position: chr26:35078522-35078813 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 64, 51

Conread position: 242-546
Cow position: chr26:6463720-6463419 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 259

Conread position: 242-570
Cow position: chr26:23926024-23926345 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 85

Conread position: 242-595
Cow position: chr26:32955670-32956007 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 242-610
Cow position: chr26:17170505-17170136 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 233

Conread position: 242-614
Cow position: chr26:2531218-2531580 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 109

Conread position: 242-617
Cow position: chr26:9491886-9491531 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 242-621
Cow position: chr26:9867155-9867543 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 103

Conread position: 242-623
Cow position: chr26:13706042-13706403 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 242-624
Cow position: chr26:3072003-3072381 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 51

Conread position: 242-624
Cow position: chr26:26216046-26215656 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 261

Conread position: 242-625
Cow position: chr26:6422078-6422462 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 242-625
Cow position: chr26:6837774-6837394 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 115

Conread position: 242-625
Cow position: chr26:7961594-7961219 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 103

Conread position: 242-625
Cow position: chr26:8874052-8873670 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 46

Conread position: 242-625
Cow position: chr26:11814740-11815122 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 50

Conread position: 242-625
Cow position: chr26:12584038-12584418 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 72

Conread position: 242-625
Cow position: chr26:15198733-15199117 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 154

Conread position: 242-625
Cow position: chr26:22191455-22191074 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 153

Conread position: 242-625
Cow position: chr26:29434443-29434058 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 243-347
Cow position: chr26:12964735-12964839 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 243-603
Cow position: chr26:31701783-31701425 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 281

Conread position: 243-625
Cow position: chr26:16865484-16865101 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 244-579
Cow position: chr26:33112422-33112751 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 148

Conread position: 244-625
Cow position: chr26:1391189-1390808 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 245-384
Cow position: chr26:30568698-30568832 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 245-440
Cow position: chr26:21243061-21242872 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 56, 75

Conread position: 245-460
Cow position: chr26:32897912-32898123 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 245-478
Cow position: chr26:2029582-2029823 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 113, 0

Conread position: 245-490
Cow position: chr26:32013587-32013348 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 100

Conread position: 245-574
Cow position: chr26:31890053-31889728 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 175

Conread position: 246-421
Cow position: chr26:8186610-8186437 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 82

Conread position: 247-446
Cow position: chr26:30034449-30034643 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 84

Conread position: 247-452
Cow position: chr26:17675775-17675974 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 33, 114

Conread position: 247-456
Cow position: chr26:26294239-26294436 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 247-618
Cow position: chr26:14174261-14173890 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 268

Conread position: 247-620
Cow position: chr26:12155160-12155526 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 90

Conread position: 247-623
Cow position: chr26:6475474-6475848 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 7

Conread position: 247-624
Cow position: chr26:818508-818872 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 35

Conread position: 250-425
Cow position: chr26:33857238-33857414 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 250-433
Cow position: chr26:15200559-15200741 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 115

Conread position: 250-458
Cow position: chr26:20846581-20846371 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 0

Conread position: 250-624
Cow position: chr26:26670791-26671159 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 97

Conread position: 250-624
Cow position: chr26:27063715-27064099 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 111

Conread position: 252-462
Cow position: chr26:34314642-34314424 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 181

Conread position: 252-623
Cow position: chr26:9604511-9604121 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 70

Conread position: 252-624
Cow position: chr26:33045034-33044669 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 84

Conread position: 254-612
Cow position: chr26:22116674-22116324 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 60

Conread position: 255-429
Cow position: chr26:5307085-5306913 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 145
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 166, 0

Conread position: 255-486
Cow position: chr26:7642625-7642855 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 50, 83

Conread position: 255-625
Cow position: chr26:6447652-6448022 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 171

Conread position: 258-380
Cow position: chr26:25299547-25299424 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 60

Conread position: 258-416
Cow position: chr26:30128072-30128227 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 133
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 258-418
Cow position: chr26:25526193-25526036 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 0

Conread position: 260-540
Cow position: chr26:20256786-20256513 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 72

Conread position: 263-445
Cow position: chr26:14293104-14292930 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 264-475
Cow position: chr26:26466781-26466985 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 264-621
Cow position: chr26:7525528-7525886 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 81

Conread position: 265-455
Cow position: chr26:28243678-28243869 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 86

Conread position: 265-570
Cow position: chr26:32652787-32653090 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 80

Conread position: 270-448
Cow position: chr26:35704324-35704145 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 153, 0

Show alignments to all cow chromosomes.