Cow genome map
| Conread name: | Pig4-TMW8021F01 |
| Conread position: | 167-471 |
| Cow position: | chr1:87831245-87830933 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 167-799 |
| Cow position: | chr1:19145189-19145845 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 175-464 |
| Cow position: | chr1:25802615-25802326 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 174, 41 |
| Conread position: | 176-468 |
| Cow position: | chr1:66776665-66776374 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 206, 86 |
| Conread position: | 179-468 |
| Cow position: | chr1:49962088-49962379 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 172, 37 |
| Conread position: | 179-468 |
| Cow position: | chr1:58385232-58384944 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 182-471 |
| Cow position: | chr1:64609352-64609652 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 184-458 |
| Cow position: | chr1:38382162-38382436 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 89, 55 |
| Conread position: | 195-447 |
| Cow position: | chr1:73017514-73017762 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 156, 12 |
| Conread position: | 195-463 |
| Cow position: | chr1:95071412-95071145 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 195-468 |
| Cow position: | chr1:18224178-18224445 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 156, 67 |
| Conread position: | 196-471 |
| Cow position: | chr1:86020386-86020657 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 150, 66 |
| Conread position: | 196-805 |
| Cow position: | chr1:61221394-61220748 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 380 |
| Conread position: | 199-471 |
| Cow position: | chr1:33855227-33854958 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 200-471 |
| Cow position: | chr1:71558790-71559058 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 153, 71 |
| Conread position: | 200-471 |
| Cow position: | chr1:72766076-72766344 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 63 |
| Conread position: | 200-471 |
| Cow position: | chr1:76208060-76208331 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 106, 7 |
| Conread position: | 200-471 |
| Cow position: | chr1:78921050-78921317 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 200-710 |
| Cow position: | chr1:38423401-38422879 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 74 |
| Conread position: | 200-756 |
| Cow position: | chr1:81925236-81925801 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 377 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 144, 71 |
| Conread position: | 203-466 |
| Cow position: | chr1:98612905-98612644 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 185, 24 |
| Conread position: | 203-471 |
| Cow position: | chr1:16298159-16297886 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 143, 59 |
| Conread position: | 203-471 |
| Cow position: | chr1:22516246-22515973 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 207-471 |
| Cow position: | chr1:43003981-43004246 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 233-470 |
| Cow position: | chr1:19635693-19635450 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 243-803 |
| Cow position: | chr1:30785620-30786197 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 129 |
| Conread position: | 247-610 |
| Cow position: | chr1:71332165-71332549 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 274-463 |
| Cow position: | chr1:39249335-39249528 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 293-466 |
| Cow position: | chr1:63454301-63454478 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 318-788 |
| Cow position: | chr1:100339765-100340246 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 256 |
| Conread position: | 479-805 |
| Cow position: | chr1:12468143-12468475 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 79 |
Show alignments to all cow chromosomes.