Cow genome map
| Conread name: | Pig4-TMW8021F01 |
| Conread position: | 132-447 |
| Cow position: | chr11:40300070-40300391 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 175-467 |
| Cow position: | chr11:25184623-25184330 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 206, 24 |
| Conread position: | 175-471 |
| Cow position: | chr11:51177209-51176914 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 179-447 |
| Cow position: | chr11:9230636-9230371 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 89, 56 |
| Conread position: | 179-464 |
| Cow position: | chr11:79740912-79741198 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 172, 83 |
| Conread position: | 179-466 |
| Cow position: | chr11:40772002-40772285 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 169, 83 |
| Conread position: | 179-469 |
| Cow position: | chr11:69565942-69565658 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 172, 83 |
| Conread position: | 179-470 |
| Cow position: | chr11:26560676-26560964 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 185, 83 |
| Conread position: | 179-471 |
| Cow position: | chr11:10948778-10949066 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 87, 47 |
| Conread position: | 179-471 |
| Cow position: | chr11:12896404-12896106 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 96, 83 |
| Conread position: | 179-471 |
| Cow position: | chr11:15279174-15279469 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 179-471 |
| Cow position: | chr11:35541433-35541722 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 87, 83 |
| Conread position: | 179-813 |
| Cow position: | chr11:7705316-7704670 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 83 |
| Conread position: | 195-466 |
| Cow position: | chr11:81337287-81337556 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 154, 54 |
| Conread position: | 195-471 |
| Cow position: | chr11:4625132-4625414 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 195-471 |
| Cow position: | chr11:33364027-33363747 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 195-471 |
| Cow position: | chr11:52483988-52483714 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 195-471 |
| Cow position: | chr11:82790982-82790708 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 171, 31 |
| Conread position: | 196-468 |
| Cow position: | chr11:59430462-59430737 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 155, 10 |
| Conread position: | 196-782 |
| Cow position: | chr11:41726412-41725813 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 179 |
| Conread position: | 197-467 |
| Cow position: | chr11:76961213-76960941 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 190, 78 |
| Conread position: | 200-466 |
| Cow position: | chr11:24030420-24030149 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 62 |
| Conread position: | 200-471 |
| Cow position: | chr11:26592157-26592423 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 153, 61 |
| Conread position: | 200-471 |
| Cow position: | chr11:35141713-35141981 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 200-471 |
| Cow position: | chr11:73138194-73137933 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 200-787 |
| Cow position: | chr11:47972245-47972843 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 201-471 |
| Cow position: | chr11:46247118-46246844 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 205-476 |
| Cow position: | chr11:16262381-16262654 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 141, 57 |
| Conread position: | 207-471 |
| Cow position: | chr11:28382277-28382015 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 165, 55 |
| Conread position: | 236-471 |
| Cow position: | chr11:21396042-21395807 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 158, 39 |
| Conread position: | 240-471 |
| Cow position: | chr11:8552381-8552150 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 111, 22 |
| Conread position: | 258-470 |
| Cow position: | chr11:42681976-42682184 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 262-470 |
| Cow position: | chr11:26467868-26467656 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 279-471 |
| Cow position: | chr11:27055184-27055368 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 590-773 |
| Cow position: | chr11:68546867-68546685 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 129, 15 |
Show alignments to all cow chromosomes.