Cow genome map
| Conread name: | Pig4-TMW8021F01 |
| Conread position: | 97-471 |
| Cow position: | chr18:37611535-37611909 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 169-466 |
| Cow position: | chr18:1663032-1663349 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 176-471 |
| Cow position: | chr18:30231534-30231831 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 171, 77 |
| Conread position: | 179-465 |
| Cow position: | chr18:10663367-10663092 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 172, 30 |
| Conread position: | 179-466 |
| Cow position: | chr18:6833853-6834139 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 91, 83 |
| Conread position: | 179-466 |
| Cow position: | chr18:15484914-15485204 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 179-467 |
| Cow position: | chr18:17228421-17228711 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 179-471 |
| Cow position: | chr18:32860329-32860038 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 49 |
| Conread position: | 179-475 |
| Cow position: | chr18:14121763-14121464 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 173, 96 |
| Conread position: | 181-468 |
| Cow position: | chr18:54058815-54059107 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 182-764 |
| Cow position: | chr18:43130098-43129502 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 190-471 |
| Cow position: | chr18:48527233-48527516 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 161, 11 |
| Conread position: | 195-466 |
| Cow position: | chr18:10101128-10100850 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 88, 62 |
| Conread position: | 195-466 |
| Cow position: | chr18:36477817-36477539 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 78, 67 |
| Conread position: | 195-467 |
| Cow position: | chr18:29224312-29224043 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 185, 46 |
| Conread position: | 195-471 |
| Cow position: | chr18:30567134-30567407 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 67 |
| Conread position: | 195-471 |
| Cow position: | chr18:33883262-33883546 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 195-471 |
| Cow position: | chr18:48392500-48392223 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 151, 79 |
| Conread position: | 195-565 |
| Cow position: | chr18:23656813-23656432 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 67, 10 |
| Conread position: | 196-471 |
| Cow position: | chr18:4578830-4579101 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 163, 66 |
| Conread position: | 196-475 |
| Cow position: | chr18:52596060-52595784 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 155, 66 |
| Conread position: | 200-463 |
| Cow position: | chr18:34021084-34020818 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 200-471 |
| Cow position: | chr18:16082493-16082225 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 200-471 |
| Cow position: | chr18:26242438-26242721 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 201-642 |
| Cow position: | chr18:30198817-30198366 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 209-471 |
| Cow position: | chr18:43638400-43638130 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 57, 53 |
| Conread position: | 215-790 |
| Cow position: | chr18:14480112-14479526 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 216-471 |
| Cow position: | chr18:37868875-37869127 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 178, 60 |
| Conread position: | 244-467 |
| Cow position: | chr18:5570489-5570264 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 264-471 |
| Cow position: | chr18:43112460-43112664 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 274-471 |
| Cow position: | chr18:38341607-38341808 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 284-791 |
| Cow position: | chr18:34052380-34052910 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 136 |
| Conread position: | 285-466 |
| Cow position: | chr18:1664350-1664534 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 293-468 |
| Cow position: | chr18:54166735-54166914 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 602-805 |
| Cow position: | chr18:33851105-33850895 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 154, 0 |
Show alignments to all cow chromosomes.