Cow genome map
| Conread name: | Pig4-TMW8021F01 |
| Conread position: | 158-464 |
| Cow position: | chr3:27784842-27784536 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 193, 25 |
| Conread position: | 167-452 |
| Cow position: | chr3:61283206-61282923 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 170-471 |
| Cow position: | chr3:24531545-24531242 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 174-471 |
| Cow position: | chr3:1498567-1498278 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 200, 52 |
| Conread position: | 175-480 |
| Cow position: | chr3:74408052-74407749 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 176-468 |
| Cow position: | chr3:8235112-8234817 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 87, 274 |
| Conread position: | 176-471 |
| Cow position: | chr3:40231626-40231330 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 171, 59 |
| Conread position: | 179-457 |
| Cow position: | chr3:72530873-72530593 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 80 |
| Conread position: | 179-467 |
| Cow position: | chr3:12255170-12254886 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 216, 83 |
| Conread position: | 179-468 |
| Cow position: | chr3:42595105-42595395 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 30 |
| Conread position: | 179-471 |
| Cow position: | chr3:1034946-1034657 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 83 |
| Conread position: | 179-471 |
| Cow position: | chr3:7245250-7245539 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 87, 83 |
| Conread position: | 179-471 |
| Cow position: | chr3:15557651-15557352 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 172, 70 |
| Conread position: | 179-471 |
| Cow position: | chr3:26474847-26474553 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 83 |
| Conread position: | 179-471 |
| Cow position: | chr3:40687375-40687081 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 139, 95 |
| Conread position: | 179-755 |
| Cow position: | chr3:13495441-13494838 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 83 |
| Conread position: | 179-763 |
| Cow position: | chr3:15746749-15747324 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 32 |
| Conread position: | 179-764 |
| Cow position: | chr3:72604040-72603451 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 70 |
| Conread position: | 179-787 |
| Cow position: | chr3:69962019-69962623 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 385 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 42, 93 |
| Conread position: | 188-471 |
| Cow position: | chr3:66887343-66887623 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 74 |
| Conread position: | 195-462 |
| Cow position: | chr3:45342800-45342534 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 163, 67 |
| Conread position: | 195-465 |
| Cow position: | chr3:40345074-40344799 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 161, 67 |
| Conread position: | 195-468 |
| Cow position: | chr3:51597758-51597484 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 156, 18 |
| Conread position: | 195-471 |
| Cow position: | chr3:73936351-73936632 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 195-471 |
| Cow position: | chr3:78546425-78546699 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 193, 44 |
| Conread position: | 195-805 |
| Cow position: | chr3:38497618-38496990 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 196-441 |
| Cow position: | chr3:39949252-39949490 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 200-447 |
| Cow position: | chr3:24887420-24887176 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 200-470 |
| Cow position: | chr3:36122012-36121746 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 200-471 |
| Cow position: | chr3:6754522-6754255 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 200-471 |
| Cow position: | chr3:18218886-18219165 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 200-471 |
| Cow position: | chr3:19797265-19797534 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 202-466 |
| Cow position: | chr3:41854754-41855015 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 74, 50 |
| Conread position: | 202-471 |
| Cow position: | chr3:64656039-64655774 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 60 |
| Conread position: | 203-471 |
| Cow position: | chr3:43007756-43008027 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 204-471 |
| Cow position: | chr3:39840267-39840002 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 182, 58 |
| Conread position: | 213-470 |
| Cow position: | chr3:18448921-18448657 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 240-471 |
| Cow position: | chr3:945769-945535 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 111, 22 |
| Conread position: | 257-459 |
| Cow position: | chr3:56099226-56099431 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 5 |
| Conread position: | 262-471 |
| Cow position: | chr3:33633262-33633475 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 264-471 |
| Cow position: | chr3:50111277-50111486 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 271-471 |
| Cow position: | chr3:26750326-26750529 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 274-471 |
| Cow position: | chr3:22867207-22867405 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 161 |
| Conread position: | 474-791 |
| Cow position: | chr3:57590865-57590555 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 81, 71 |
| Conread position: | 475-803 |
| Cow position: | chr3:23944496-23944169 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 119 |
| Conread position: | 485-805 |
| Cow position: | chr3:34556862-34557174 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 60 |
Show alignments to all cow chromosomes.