Cow genome map
| Conread name: | Pig4-TMW8021F01 |
| Conread position: | 167-471 |
| Cow position: | chr9:3722569-3722267 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 75, 98 |
| Conread position: | 176-471 |
| Cow position: | chr9:23438519-23438233 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 175, 27 |
| Conread position: | 179-427 |
| Cow position: | chr9:32396264-32396512 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 179-471 |
| Cow position: | chr9:31341721-31342011 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 88, 83 |
| Conread position: | 179-471 |
| Cow position: | chr9:51318074-51318374 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 179-471 |
| Cow position: | chr9:53531529-53531233 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 172, 24 |
| Conread position: | 179-764 |
| Cow position: | chr9:34553420-34554021 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 78 |
| Conread position: | 179-790 |
| Cow position: | chr9:8162831-8163458 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 91 |
| Conread position: | 180-466 |
| Cow position: | chr9:59529999-59529713 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 93, 73 |
| Conread position: | 182-791 |
| Cow position: | chr9:5607979-5608574 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 188-463 |
| Cow position: | chr9:19567972-19568249 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 108, 81 |
| Conread position: | 195-465 |
| Cow position: | chr9:3932297-3932563 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 151, 89 |
| Conread position: | 195-467 |
| Cow position: | chr9:49301507-49301779 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 151, 76 |
| Conread position: | 196-471 |
| Cow position: | chr9:9957374-9957649 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 99, 35 |
| Conread position: | 196-471 |
| Cow position: | chr9:33669054-33669330 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 151, 66 |
| Conread position: | 196-788 |
| Cow position: | chr9:52038170-52037546 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 198-804 |
| Cow position: | chr9:64025024-64025660 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 66 |
| Conread position: | 200-466 |
| Cow position: | chr9:8908761-8909025 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 35, 63 |
| Conread position: | 200-471 |
| Cow position: | chr9:25239717-25239984 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 200-755 |
| Cow position: | chr9:10665703-10665130 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 62 |
| Conread position: | 200-766 |
| Cow position: | chr9:47836591-47835978 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 400 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 93, 62 |
| Conread position: | 221-590 |
| Cow position: | chr9:15987808-15987440 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 154, 12 |
| Conread position: | 245-803 |
| Cow position: | chr9:26124448-26123885 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 286-471 |
| Cow position: | chr9:42901717-42901906 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 289-462 |
| Cow position: | chr9:41054572-41054395 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 58, 147 |
| Conread position: | 522-789 |
| Cow position: | chr9:27004936-27004663 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 617-800 |
| Cow position: | chr9:38691745-38691561 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 121, 96 |
Show alignments to all cow chromosomes.