Cow genome map
| Conread name: | Pig4-TMW8021F01 |
| Conread position: | 97-791 |
| Cow position: | chrX:6043655-6044360 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 127-471 |
| Cow position: | chrX:18989258-18988912 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 135 |
| Conread position: | 175-466 |
| Cow position: | chrX:8542220-8541922 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 92 |
| Conread position: | 176-471 |
| Cow position: | chrX:20734392-20734096 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 86 |
| Conread position: | 179-453 |
| Cow position: | chrX:16733006-16733281 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 207, 67 |
| Conread position: | 179-467 |
| Cow position: | chrX:3396029-3396319 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 167, 75 |
| Conread position: | 179-467 |
| Cow position: | chrX:8518815-8518527 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 179-467 |
| Cow position: | chrX:33631900-33631609 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 167, 28 |
| Conread position: | 179-468 |
| Cow position: | chrX:11674798-11674510 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 173, 78 |
| Conread position: | 179-468 |
| Cow position: | chrX:14908756-14908465 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 172, 41 |
| Conread position: | 179-468 |
| Cow position: | chrX:17265306-17265593 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 83 |
| Conread position: | 179-468 |
| Cow position: | chrX:20654320-20654024 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 50, 86 |
| Conread position: | 179-471 |
| Cow position: | chrX:3808146-3807854 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 138, 83 |
| Conread position: | 179-471 |
| Cow position: | chrX:4409312-4409010 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 179-471 |
| Cow position: | chrX:12724509-12724218 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 172, 92 |
| Conread position: | 179-471 |
| Cow position: | chrX:13058304-13058009 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 84 |
| Conread position: | 179-471 |
| Cow position: | chrX:13889576-13889287 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 207, 83 |
| Conread position: | 179-471 |
| Cow position: | chrX:17200543-17200238 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 55, 84 |
| Conread position: | 179-471 |
| Cow position: | chrX:18656065-18656354 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 174, 98 |
| Conread position: | 179-471 |
| Cow position: | chrX:37067014-37066723 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 172, 20 |
| Conread position: | 179-570 |
| Cow position: | chrX:42530744-42531157 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 184, 95 |
| Conread position: | 180-441 |
| Cow position: | chrX:40788899-40788628 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 120 |
| Conread position: | 180-471 |
| Cow position: | chrX:37955642-37955352 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 169, 82 |
| Conread position: | 182-468 |
| Cow position: | chrX:5648658-5648932 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 164, 80 |
| Conread position: | 190-468 |
| Cow position: | chrX:25281756-25282036 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 161, 72 |
| Conread position: | 195-445 |
| Cow position: | chrX:45200164-45200415 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 195-452 |
| Cow position: | chrX:20504488-20504232 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 12 |
| Conread position: | 195-466 |
| Cow position: | chrX:41192414-41192145 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 67, 80 |
| Conread position: | 195-471 |
| Cow position: | chrX:7806102-7805827 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 156, 67 |
| Conread position: | 195-471 |
| Cow position: | chrX:13404621-13404901 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 195-471 |
| Cow position: | chrX:23414658-23414937 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 134, 76 |
| Conread position: | 195-471 |
| Cow position: | chrX:25404634-25404905 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 196-467 |
| Cow position: | chrX:21815892-21815621 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 66 |
| Conread position: | 197-468 |
| Cow position: | chrX:26749151-26749425 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 189, 65 |
| Conread position: | 200-471 |
| Cow position: | chrX:17783218-17782950 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 200-471 |
| Cow position: | chrX:27594461-27594729 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 201-463 |
| Cow position: | chrX:3582915-3582651 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 61 |
| Conread position: | 201-464 |
| Cow position: | chrX:24006104-24006366 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 197, 71 |
| Conread position: | 201-471 |
| Cow position: | chrX:13405579-13405846 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 95, 61 |
| Conread position: | 207-471 |
| Cow position: | chrX:38140320-38140589 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 151, 55 |
| Conread position: | 213-471 |
| Cow position: | chrX:9911065-9911323 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 133, 49 |
| Conread position: | 234-471 |
| Cow position: | chrX:12823691-12823451 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 240-466 |
| Cow position: | chrX:6642384-6642147 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 22 |
| Conread position: | 240-471 |
| Cow position: | chrX:26508924-26508688 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 22 |
| Conread position: | 261-805 |
| Cow position: | chrX:22125201-22125778 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 270 |
| Conread position: | 262-446 |
| Cow position: | chrX:30429684-30429872 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 286-468 |
| Cow position: | chrX:12094945-12095131 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 296-462 |
| Cow position: | chrX:22139613-22139784 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 311-791 |
| Cow position: | chrX:39463452-39463955 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 478-798 |
| Cow position: | chrX:36840118-36839797 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 21 |
Show alignments to all cow chromosomes.