Cow genome map
| Conread name: | Pig4-TMW8030N23 |
| Conread position: | 1-129 |
| Cow position: | chr11:69293515-69293643 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 1-135 |
| Cow position: | chr11:20761983-20761853 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 2-129 |
| Cow position: | chr11:69076047-69075922 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-133 |
| Cow position: | chr11:32782750-32782876 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-133 |
| Cow position: | chr11:58173762-58173633 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-133 |
| Cow position: | chr11:59916285-59916154 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 2-133 |
| Cow position: | chr11:79018921-79019051 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-135 |
| Cow position: | chr11:26845457-26845588 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-135 |
| Cow position: | chr11:28644227-28644093 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-136 |
| Cow position: | chr11:62778581-62778446 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 3-135 |
| Cow position: | chr11:10363250-10363380 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-136 |
| Cow position: | chr11:22747193-22747326 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 4-128 |
| Cow position: | chr11:3234213-3234088 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-131 |
| Cow position: | chr11:40573197-40573325 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 6-124 |
| Cow position: | chr11:45437412-45437295 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 6-135 |
| Cow position: | chr11:62226123-62225992 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 6-135 |
| Cow position: | chr11:66424744-66424873 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 7-122 |
| Cow position: | chr11:52415568-52415451 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-135 |
| Cow position: | chr11:44032145-44032017 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-129 |
| Cow position: | chr11:44234489-44234367 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-133 |
| Cow position: | chr11:377509-377634 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 12-144 |
| Cow position: | chr11:55714570-55714439 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 15-129 |
| Cow position: | chr11:261141-261256 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 17-133 |
| Cow position: | chr11:46452259-46452143 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-129 |
| Cow position: | chr11:41980084-41980193 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-135 |
| Cow position: | chr11:2900600-2900715 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-135 |
| Cow position: | chr11:5201532-5201646 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 20-135 |
| Cow position: | chr11:28168302-28168417 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-127 |
| Cow position: | chr11:31326126-31326020 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-129 |
| Cow position: | chr11:34646709-34646601 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-131 |
| Cow position: | chr11:37042090-37041981 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 23-135 |
| Cow position: | chr11:8437573-8437688 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 27-129 |
| Cow position: | chr11:48315283-48315385 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-135 |
| Cow position: | chr11:11523343-11523452 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 28-122 |
| Cow position: | chr11:44222997-44222904 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 29-130 |
| Cow position: | chr11:434763-434863 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 29-130 |
| Cow position: | chr11:23407576-23407475 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-135 |
| Cow position: | chr11:17676261-17676367 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-135 |
| Cow position: | chr11:31410766-31410872 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-135 |
| Cow position: | chr11:46922773-46922880 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 31-130 |
| Cow position: | chr11:4411759-4411858 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-133 |
| Cow position: | chr11:31228072-31227970 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-133 |
| Cow position: | chr11:83230291-83230393 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-135 |
| Cow position: | chr11:30192289-30192184 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-133 |
| Cow position: | chr11:51729395-51729294 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-135 |
| Cow position: | chr11:20205744-20205846 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-136 |
| Cow position: | chr11:58228721-58228620 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-129 |
| Cow position: | chr11:62620478-62620388 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 77 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-135 |
| Cow position: | chr11:77319516-77319420 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-136 |
| Cow position: | chr11:62812848-62812945 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-135 |
| Cow position: | chr11:41293718-41293812 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-135 |
| Cow position: | chr11:44636655-44636748 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 41-135 |
| Cow position: | chr11:52297121-52297215 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-135 |
| Cow position: | chr11:25320284-25320191 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-135 |
| Cow position: | chr11:33409168-33409256 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 76 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.