Cow genome map
| Conread name: | Pig4-TMW8030N23 |
| Conread position: | 1-130 |
| Cow position: | chrX:33640160-33640030 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-134 |
| Cow position: | chrX:41884227-41884361 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-122 |
| Cow position: | chrX:29327946-29327825 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-129 |
| Cow position: | chrX:17726158-17726031 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 2-133 |
| Cow position: | chrX:20743785-20743656 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-129 |
| Cow position: | chrX:878199-878324 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-128 |
| Cow position: | chrX:8797431-8797306 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 6-133 |
| Cow position: | chrX:27667606-27667477 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 7-122 |
| Cow position: | chrX:29050426-29050310 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 7-129 |
| Cow position: | chrX:40531864-40531987 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 7-133 |
| Cow position: | chrX:5872494-5872369 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-134 |
| Cow position: | chrX:40557496-40557628 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-136 |
| Cow position: | chrX:6850388-6850260 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 9-135 |
| Cow position: | chrX:34508721-34508594 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 10-133 |
| Cow position: | chrX:47342289-47342167 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 12-135 |
| Cow position: | chrX:38853372-38853248 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 21-135 |
| Cow position: | chrX:45670384-45670271 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 23-122 |
| Cow position: | chrX:33493939-33493839 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 23-134 |
| Cow position: | chrX:32942916-32943025 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 99, 31 |
| Conread position: | 23-141 |
| Cow position: | chrX:24547339-24547458 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 24-129 |
| Cow position: | chrX:13177315-13177420 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-131 |
| Cow position: | chrX:23188623-23188730 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-129 |
| Cow position: | chrX:20957398-20957294 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-135 |
| Cow position: | chrX:2936115-2936007 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 27-119 |
| Cow position: | chrX:24633853-24633761 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 78 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-144 |
| Cow position: | chrX:11656239-11656123 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 27-144 |
| Cow position: | chrX:13647627-13647743 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 29-129 |
| Cow position: | chrX:8869245-8869346 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 29-129 |
| Cow position: | chrX:27668802-27668902 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-129 |
| Cow position: | chrX:40685172-40685272 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-135 |
| Cow position: | chrX:23471709-23471816 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 29-135 |
| Cow position: | chrX:40046422-40046525 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 31-129 |
| Cow position: | chrX:31436628-31436530 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-131 |
| Cow position: | chrX:23497538-23497637 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 31-135 |
| Cow position: | chrX:23136893-23136790 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 33-128 |
| Cow position: | chrX:17525715-17525810 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-129 |
| Cow position: | chrX:6599630-6599726 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-133 |
| Cow position: | chrX:23092023-23091922 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 35-135 |
| Cow position: | chrX:31983435-31983535 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-135 |
| Cow position: | chrX:42380962-42381062 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-135 |
| Cow position: | chrX:20583812-20583716 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-135 |
| Cow position: | chrX:34314170-34314074 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 80 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-129 |
| Cow position: | chrX:20584472-20584384 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-130 |
| Cow position: | chrX:6480452-6480541 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-135 |
| Cow position: | chrX:4615868-4615960 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 41-135 |
| Cow position: | chrX:31312173-31312079 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-136 |
| Cow position: | chrX:34411990-34411895 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.