Cow genome map

Conread name: Pig4-TMW8042M05

Conread position: 156-329
Cow position: chr1:81580474-81580298 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 178-310
Cow position: chr1:78690478-78690347 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 200-348
Cow position: chr1:67919039-67918890 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 45

Conread position: 203-351
Cow position: chr1:65530810-65530960 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 14

Conread position: 203-351
Cow position: chr1:65546662-65546808 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 14

Conread position: 204-330
Cow position: chr1:26069840-26069965 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 76, 20

Conread position: 204-352
Cow position: chr1:95153460-95153314 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 128, 22

Conread position: 220-331
Cow position: chr1:65883414-65883302 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 220-354
Cow position: chr1:61030985-61030846 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 220-374
Cow position: chr1:24445379-24445533 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 133

Conread position: 220-394
Cow position: chr1:81613683-81613502 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 109

Conread position: 226-424
Cow position: chr1:77880461-77880663 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 164

Conread position: 354-552
Cow position: chr1:95618547-95618748 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 374-528
Cow position: chr1:101268071-101267922 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 378-528
Cow position: chr1:85712372-85712522 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 27

Conread position: 387-529
Cow position: chr1:72422467-72422326 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 31

Conread position: 404-528
Cow position: chr1:72813572-72813698 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 45

Conread position: 405-528
Cow position: chr1:54157252-54157378 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 411-528
Cow position: chr1:73721324-73721442 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 414-528
Cow position: chr1:38706887-38706772 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 418-525
Cow position: chr1:242530-242636 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 5, 13

Conread position: 418-528
Cow position: chr1:8670745-8670855 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 422-529
Cow position: chr1:42138834-42138941 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-525
Cow position: chr1:6788306-6788204 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-525
Cow position: chr1:48581106-48581208 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-526
Cow position: chr1:22730711-22730814 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr1:28470803-28470907 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-527
Cow position: chr1:102346059-102345956 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 423-528
Cow position: chr1:5023785-5023680 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr1:22035589-22035693 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 423-528
Cow position: chr1:31357532-31357427 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr1:42360263-42360370 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 423-528
Cow position: chr1:48769779-48769884 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 423-528
Cow position: chr1:80336272-80336167 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr1:57089702-57089596 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 423-529
Cow position: chr1:64804125-64804019 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 423-534
Cow position: chr1:51531730-51531839 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 423-550
Cow position: chr1:101946737-101946611 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 424-522
Cow position: chr1:65103599-65103696 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 424-527
Cow position: chr1:4374359-4374256 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-527
Cow position: chr1:21787314-21787417 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr1:23512682-23512577 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 424-528
Cow position: chr1:45223559-45223663 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr1:54258545-54258648 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 424-528
Cow position: chr1:55428979-55428874 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 424-528
Cow position: chr1:71916141-71916038 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 424-528
Cow position: chr1:87095236-87095132 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr1:87936876-87936980 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-528
Cow position: chr1:95835820-95835716 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr1:21560990-21561095 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr1:31934485-31934590 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr1:65318553-65318658 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 424-529
Cow position: chr1:98576026-98576130 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 424-529
Cow position: chr1:101792141-101792036 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr1:30504479-30504590 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 424-535
Cow position: chr1:53425154-53425266 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 424-535
Cow position: chr1:75382959-75383066 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 424-535
Cow position: chr1:85550100-85549989 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-544
Cow position: chr1:8347101-8347221 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr1:54156756-54156629 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 424-552
Cow position: chr1:67529033-67529161 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 424-552
Cow position: chr1:75141975-75142103 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 424-553
Cow position: chr1:56477570-56477700 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 425-527
Cow position: chr1:34771524-34771422 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr1:8287651-8287548 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr1:56225764-56225867 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr1:71665953-71665850 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr1:72068856-72068753 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-528
Cow position: chr1:82880625-82880726 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 425-529
Cow position: chr1:16962031-16961927 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 425-529
Cow position: chr1:97231939-97232043 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr1:43312052-43311942 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 425-535
Cow position: chr1:61542939-61542830 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 425-535
Cow position: chr1:91811761-91811866 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 425-552
Cow position: chr1:15547451-15547576 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 426-527
Cow position: chr1:53308409-53308311 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 426-528
Cow position: chr1:4032612-4032714 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr1:19515639-19515537 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr1:44506951-44507055 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 426-528
Cow position: chr1:69264790-69264890 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 426-528
Cow position: chr1:77739702-77739804 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 426-528
Cow position: chr1:98636685-98636787 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 426-535
Cow position: chr1:20667762-20667653 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr1:7908018-7908119 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 427-528
Cow position: chr1:22823886-22823987 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-535
Cow position: chr1:37309538-37309430 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 428-529
Cow position: chr1:26616094-26615991 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 428-535
Cow position: chr1:74081999-74081892 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 428-535
Cow position: chr1:78068087-78067980 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 430-526
Cow position: chr1:6381756-6381852 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 431-535
Cow position: chr1:24561524-24561420 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 431-535
Cow position: chr1:24570962-24570858 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.