Cow genome map
| Conread name: | Pig4-TMW8042M05 |
| Conread position: | 138-354 |
| Cow position: | chr3:36461431-36461225 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 193, 39 |
| Conread position: | 181-356 |
| Cow position: | chr3:49232095-49231917 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 12, 155 |
| Conread position: | 195-424 |
| Cow position: | chr3:27670670-27670454 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 203-399 |
| Cow position: | chr3:34392038-34392234 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 157, 77 |
| Conread position: | 204-338 |
| Cow position: | chr3:75151202-75151333 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 205-338 |
| Cow position: | chr3:62622972-62623102 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 209-308 |
| Cow position: | chr3:25702150-25702250 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 220-336 |
| Cow position: | chr3:43863545-43863661 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 222-348 |
| Cow position: | chr3:61169978-61169855 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 60 |
| Conread position: | 404-539 |
| Cow position: | chr3:81359179-81359044 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-528 |
| Cow position: | chr3:75238386-75238509 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-535 |
| Cow position: | chr3:79292758-79292887 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 418-528 |
| Cow position: | chr3:73708989-73709099 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 419-528 |
| Cow position: | chr3:27976582-27976472 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 421-528 |
| Cow position: | chr3:57877510-57877618 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 423-528 |
| Cow position: | chr3:56430-56325 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 423-528 |
| Cow position: | chr3:37041367-37041471 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 423-528 |
| Cow position: | chr3:64373210-64373104 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 423-528 |
| Cow position: | chr3:65019918-65019813 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 423-528 |
| Cow position: | chr3:67520222-67520114 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 423-535 |
| Cow position: | chr3:12711968-12711856 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 423-539 |
| Cow position: | chr3:45222206-45222088 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 424-523 |
| Cow position: | chr3:43727026-43727126 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 424-523 |
| Cow position: | chr3:55819707-55819805 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 424-525 |
| Cow position: | chr3:74900692-74900591 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-526 |
| Cow position: | chr3:22871895-22871793 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-526 |
| Cow position: | chr3:53270778-53270880 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-528 |
| Cow position: | chr3:5097155-5097259 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-528 |
| Cow position: | chr3:18459579-18459476 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 424-528 |
| Cow position: | chr3:23444940-23444836 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-528 |
| Cow position: | chr3:55085223-55085117 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 424-529 |
| Cow position: | chr3:14546950-14547054 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 424-529 |
| Cow position: | chr3:18059650-18059756 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 424-529 |
| Cow position: | chr3:40213085-40212981 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 424-529 |
| Cow position: | chr3:51033314-51033419 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-529 |
| Cow position: | chr3:57760446-57760551 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-529 |
| Cow position: | chr3:70334747-70334642 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-535 |
| Cow position: | chr3:210267-210378 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-535 |
| Cow position: | chr3:2637874-2637985 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-535 |
| Cow position: | chr3:24935313-24935424 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-535 |
| Cow position: | chr3:56949140-56949029 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-535 |
| Cow position: | chr3:71423603-71423496 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 424-535 |
| Cow position: | chr3:81277520-81277409 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-543 |
| Cow position: | chr3:48810697-48810578 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-552 |
| Cow position: | chr3:15228875-15228747 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-552 |
| Cow position: | chr3:72503950-72503819 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 425-526 |
| Cow position: | chr3:1517563-1517462 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-527 |
| Cow position: | chr3:73820419-73820318 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 425-528 |
| Cow position: | chr3:3656463-3656566 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-528 |
| Cow position: | chr3:11292299-11292196 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-528 |
| Cow position: | chr3:11711914-11712017 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-535 |
| Cow position: | chr3:4319660-4319770 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-535 |
| Cow position: | chr3:53739236-53739126 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-535 |
| Cow position: | chr3:57624413-57624523 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-543 |
| Cow position: | chr3:23471510-23471392 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-525 |
| Cow position: | chr3:27697028-27696929 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-527 |
| Cow position: | chr3:76268025-76267924 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-528 |
| Cow position: | chr3:20841923-20841821 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-528 |
| Cow position: | chr3:31309404-31309302 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-534 |
| Cow position: | chr3:17934988-17934880 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-528 |
| Cow position: | chr3:54100775-54100674 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-528 |
| Cow position: | chr3:56704370-56704269 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-528 |
| Cow position: | chr3:59474073-59474174 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-528 |
| Cow position: | chr3:74878638-74878537 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-529 |
| Cow position: | chr3:28908252-28908150 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-535 |
| Cow position: | chr3:71231347-71231454 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 427-536 |
| Cow position: | chr3:28258046-28258155 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-547 |
| Cow position: | chr3:71497187-71497067 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-526 |
| Cow position: | chr3:15443776-15443679 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 428-527 |
| Cow position: | chr3:71238106-71238204 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 431-535 |
| Cow position: | chr3:48252840-48252944 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 431-535 |
| Cow position: | chr3:57577652-57577756 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.