Cow genome map

Conread name: Pig4-TMW8065G24

Conread position: 1-500
Cow position: chr1:98551338-98551842 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 1-572
Cow position: chr1:81290138-81290708 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 204

Conread position: 1-578
Cow position: chr1:41696678-41697263 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 139

Conread position: 1-585
Cow position: chr1:1981494-1980893 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 228

Conread position: 1-586
Cow position: chr1:81569419-81568811 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 321

Conread position: 2-555
Cow position: chr1:57576144-57575577 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 144

Conread position: 3-400
Cow position: chr1:665990-666388 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 69

Conread position: 3-554
Cow position: chr1:92963009-92963563 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 239

Conread position: 3-578
Cow position: chr1:82936965-82936395 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 229

Conread position: 4-528
Cow position: chr1:52039256-52039793 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 158

Conread position: 11-421
Cow position: chr1:82884758-82884350 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 151

Conread position: 11-497
Cow position: chr1:3167439-3166953 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 150

Conread position: 11-559
Cow position: chr1:54207189-54206628 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 87

Conread position: 12-577
Cow position: chr1:8251-8827 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 13-397
Cow position: chr1:3035360-3034980 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 45

Conread position: 21-555
Cow position: chr1:62963921-62964455 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 14

Conread position: 37-454
Cow position: chr1:20204678-20205106 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 205

Conread position: 38-559
Cow position: chr1:24133397-24132872 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 47

Conread position: 44-562
Cow position: chr1:101713775-101714310 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 54

Conread position: 66-554
Cow position: chr1:41056366-41056866 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 126

Conread position: 70-486
Cow position: chr1:88652317-88652747 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 91

Conread position: 88-500
Cow position: chr1:81613089-81613512 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 410

Conread position: 110-558
Cow position: chr1:97954719-97954293 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 298
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 56

Conread position: 114-559
Cow position: chr1:14379798-14379359 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 305
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 16, 83

Conread position: 117-319
Cow position: chr1:82338049-82337847 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 71

Conread position: 117-430
Cow position: chr1:80899844-80900172 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 152, 41

Conread position: 117-575
Cow position: chr1:197266-196799 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 52

Conread position: 120-397
Cow position: chr1:45535441-45535726 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 201, 46

Conread position: 121-576
Cow position: chr1:61884655-61885121 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 242

Conread position: 129-577
Cow position: chr1:78810784-78811247 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 29

Conread position: 130-506
Cow position: chr1:47233726-47233349 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 97

Conread position: 130-514
Cow position: chr1:71253806-71253419 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 106

Conread position: 130-575
Cow position: chr1:43505272-43505732 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 92

Conread position: 133-554
Cow position: chr1:93528442-93528880 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 288
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 149, 287

Conread position: 133-572
Cow position: chr1:70538355-70538810 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 133-578
Cow position: chr1:78857570-78857116 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 25

Conread position: 135-454
Cow position: chr1:92369470-92369817 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 23

Conread position: 141-559
Cow position: chr1:71079193-71078771 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 25

Conread position: 149-562
Cow position: chr1:43389280-43388860 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 76

Conread position: 163-500
Cow position: chr1:93043807-93044140 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 178, 0

Conread position: 172-578
Cow position: chr1:68862826-68863229 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 258
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 48

Conread position: 188-555
Cow position: chr1:58754978-58754611 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 131, 32

Conread position: 205-555
Cow position: chr1:89388155-89388530 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 249
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 124

Conread position: 222-578
Cow position: chr1:86110895-86110535 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 121

Conread position: 232-545
Cow position: chr1:87197674-87197997 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 108, 71

Conread position: 238-586
Cow position: chr1:91023615-91023249 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 83, 179

Conread position: 244-451
Cow position: chr1:87440327-87440543 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 80

Conread position: 273-577
Cow position: chr1:56618763-56618444 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 167

Conread position: 325-559
Cow position: chr1:54267991-54267749 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 14

Conread position: 341-577
Cow position: chr1:81481421-81481176 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 149

Show alignments to all cow chromosomes.