Cow genome map
Conread name: | Pig4-TMW8065G24 |
Conread position: | 1-500 |
Cow position: | chr1:98551338-98551842 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 21 |
Conread position: | 1-572 |
Cow position: | chr1:81290138-81290708 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 335, 204 |
Conread position: | 1-578 |
Cow position: | chr1:41696678-41697263 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 139 |
Conread position: | 1-585 |
Cow position: | chr1:1981494-1980893 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 228 |
Conread position: | 1-586 |
Cow position: | chr1:81569419-81568811 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 321 |
Conread position: | 2-555 |
Cow position: | chr1:57576144-57575577 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 144 |
Conread position: | 3-400 |
Cow position: | chr1:665990-666388 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 69 |
Conread position: | 3-554 |
Cow position: | chr1:92963009-92963563 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 239 |
Conread position: | 3-578 |
Cow position: | chr1:82936965-82936395 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 229 |
Conread position: | 4-528 |
Cow position: | chr1:52039256-52039793 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 158 |
Conread position: | 11-421 |
Cow position: | chr1:82884758-82884350 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 151 |
Conread position: | 11-497 |
Cow position: | chr1:3167439-3166953 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 150 |
Conread position: | 11-559 |
Cow position: | chr1:54207189-54206628 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 87 |
Conread position: | 12-577 |
Cow position: | chr1:8251-8827 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 69 |
Conread position: | 13-397 |
Cow position: | chr1:3035360-3034980 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 45 |
Conread position: | 21-555 |
Cow position: | chr1:62963921-62964455 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 318, 14 |
Conread position: | 37-454 |
Cow position: | chr1:20204678-20205106 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 205 |
Conread position: | 38-559 |
Cow position: | chr1:24133397-24132872 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 47 |
Conread position: | 44-562 |
Cow position: | chr1:101713775-101714310 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 54 |
Conread position: | 66-554 |
Cow position: | chr1:41056366-41056866 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 126 |
Conread position: | 70-486 |
Cow position: | chr1:88652317-88652747 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 91 |
Conread position: | 88-500 |
Cow position: | chr1:81613089-81613512 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 410 |
Conread position: | 110-558 |
Cow position: | chr1:97954719-97954293 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 298 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 96, 56 |
Conread position: | 114-559 |
Cow position: | chr1:14379798-14379359 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 305 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 16, 83 |
Conread position: | 117-319 |
Cow position: | chr1:82338049-82337847 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 37, 71 |
Conread position: | 117-430 |
Cow position: | chr1:80899844-80900172 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 229 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 152, 41 |
Conread position: | 117-575 |
Cow position: | chr1:197266-196799 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 52 |
Conread position: | 120-397 |
Cow position: | chr1:45535441-45535726 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 208 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 201, 46 |
Conread position: | 121-576 |
Cow position: | chr1:61884655-61885121 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 242 |
Conread position: | 129-577 |
Cow position: | chr1:78810784-78811247 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 29 |
Conread position: | 130-506 |
Cow position: | chr1:47233726-47233349 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 97 |
Conread position: | 130-514 |
Cow position: | chr1:71253806-71253419 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 106 |
Conread position: | 130-575 |
Cow position: | chr1:43505272-43505732 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 92 |
Conread position: | 133-554 |
Cow position: | chr1:93528442-93528880 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 288 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 149, 287 |
Conread position: | 133-572 |
Cow position: | chr1:70538355-70538810 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 0 |
Conread position: | 133-578 |
Cow position: | chr1:78857570-78857116 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 25 |
Conread position: | 135-454 |
Cow position: | chr1:92369470-92369817 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 240 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 54, 23 |
Conread position: | 141-559 |
Cow position: | chr1:71079193-71078771 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 25 |
Conread position: | 149-562 |
Cow position: | chr1:43389280-43388860 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 76 |
Conread position: | 163-500 |
Cow position: | chr1:93043807-93044140 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 224 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 178, 0 |
Conread position: | 172-578 |
Cow position: | chr1:68862826-68863229 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 258 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 136, 48 |
Conread position: | 188-555 |
Cow position: | chr1:58754978-58754611 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 260 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 131, 32 |
Conread position: | 205-555 |
Cow position: | chr1:89388155-89388530 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 249 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 57, 124 |
Conread position: | 222-578 |
Cow position: | chr1:86110895-86110535 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 241 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 12, 121 |
Conread position: | 232-545 |
Cow position: | chr1:87197674-87197997 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 220 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 108, 71 |
Conread position: | 238-586 |
Cow position: | chr1:91023615-91023249 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 245 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 83, 179 |
Conread position: | 244-451 |
Cow position: | chr1:87440327-87440543 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 150 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 96, 80 |
Conread position: | 273-577 |
Cow position: | chr1:56618763-56618444 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 215 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 48, 167 |
Conread position: | 325-559 |
Cow position: | chr1:54267991-54267749 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 171 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 26, 14 |
Conread position: | 341-577 |
Cow position: | chr1:81481421-81481176 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 167 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 15, 149 |
Show alignments to all cow chromosomes.