Cow genome map
| Conread name: | Pig4-TMW8065G24 |
| Conread position: | 1-444 |
| Cow position: | chr11:6154007-6154451 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 37 |
| Conread position: | 1-497 |
| Cow position: | chr11:69118888-69119390 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 309 |
| Conread position: | 1-506 |
| Cow position: | chr11:62151286-62150788 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 34 |
| Conread position: | 1-555 |
| Cow position: | chr11:35579846-35580426 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 1-559 |
| Cow position: | chr11:13061627-13061085 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 110 |
| Conread position: | 1-575 |
| Cow position: | chr11:50153223-50152626 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 1-576 |
| Cow position: | chr11:1625626-1625036 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 14 |
| Conread position: | 2-430 |
| Cow position: | chr11:10213963-10213535 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 123 |
| Conread position: | 3-351 |
| Cow position: | chr11:84774711-84775050 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 123, 157 |
| Conread position: | 3-414 |
| Cow position: | chr11:59702078-59702499 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 91 |
| Conread position: | 3-422 |
| Cow position: | chr11:16251662-16251223 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 254 |
| Conread position: | 3-586 |
| Cow position: | chr11:52297629-52297029 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 111 |
| Conread position: | 11-390 |
| Cow position: | chr11:46329102-46329483 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 67 |
| Conread position: | 11-424 |
| Cow position: | chr11:50197842-50197410 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 11-561 |
| Cow position: | chr11:32198543-32199114 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 72 |
| Conread position: | 16-402 |
| Cow position: | chr11:47586739-47586349 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 9 |
| Conread position: | 20-586 |
| Cow position: | chr11:37974538-37975116 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 33-576 |
| Cow position: | chr11:62490058-62490608 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 107-559 |
| Cow position: | chr11:85723402-85723863 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 125 |
| Conread position: | 109-402 |
| Cow position: | chr11:62016568-62016280 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 117-586 |
| Cow position: | chr11:74316417-74316901 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 118-421 |
| Cow position: | chr11:24601678-24601984 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 233 |
| Conread position: | 128-537 |
| Cow position: | chr11:45646869-45646446 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 36 |
| Conread position: | 130-396 |
| Cow position: | chr11:83323300-83323558 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 191, 39 |
| Conread position: | 130-450 |
| Cow position: | chr11:18244218-18243890 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 146, 293 |
| Conread position: | 131-415 |
| Cow position: | chr11:15632831-15632540 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 185, 32 |
| Conread position: | 131-559 |
| Cow position: | chr11:17036827-17036363 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 133-450 |
| Cow position: | chr11:30912265-30911952 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 271, 26 |
| Conread position: | 133-451 |
| Cow position: | chr11:11232728-11232403 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 135-554 |
| Cow position: | chr11:62663504-62663078 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 106, 214 |
| Conread position: | 142-454 |
| Cow position: | chr11:47544863-47545187 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 142-555 |
| Cow position: | chr11:34120929-34121360 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 183 |
| Conread position: | 155-577 |
| Cow position: | chr11:20238421-20238863 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 172-541 |
| Cow position: | chr11:11469868-11469502 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 149, 55 |
| Conread position: | 172-559 |
| Cow position: | chr11:62620150-62620545 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 173, 55 |
| Conread position: | 175-552 |
| Cow position: | chr11:21728499-21728126 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 167, 50 |
| Conread position: | 190-576 |
| Cow position: | chr11:11557952-11558357 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 131, 42 |
| Conread position: | 234-541 |
| Cow position: | chr11:30830791-30830467 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 244-576 |
| Cow position: | chr11:80556055-80556404 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 141 |
| Conread position: | 246-559 |
| Cow position: | chr11:80756947-80756621 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 231 |
| Conread position: | 250-535 |
| Cow position: | chr11:2576063-2575763 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 257-568 |
| Cow position: | chr11:18851766-18852081 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 259-574 |
| Cow position: | chr11:45434936-45435259 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 349-574 |
| Cow position: | chr11:18447544-18447316 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 146 |
| Conread position: | 386-559 |
| Cow position: | chr11:63478362-63478531 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.