Cow genome map
| Conread name: | Pig4-TMW8065G24 |
| Conread position: | 1-363 |
| Cow position: | chr16:49141948-49141591 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 220 |
| Conread position: | 1-421 |
| Cow position: | chr16:24147768-24148198 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 157 |
| Conread position: | 1-451 |
| Cow position: | chr16:33226921-33226468 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 82 |
| Conread position: | 1-506 |
| Cow position: | chr16:25170003-25170518 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 159 |
| Conread position: | 1-507 |
| Cow position: | chr16:40561836-40562356 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 497 |
| Conread position: | 1-559 |
| Cow position: | chr16:51598992-51598427 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 160 |
| Conread position: | 1-572 |
| Cow position: | chr16:13989596-13990165 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 1-572 |
| Cow position: | chr16:33704416-33705000 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 123 |
| Conread position: | 1-578 |
| Cow position: | chr16:45139278-45139868 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 162 |
| Conread position: | 1-585 |
| Cow position: | chr16:49126573-49125979 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 155 |
| Conread position: | 2-576 |
| Cow position: | chr16:56231433-56232015 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 371 |
| Conread position: | 2-577 |
| Cow position: | chr16:48398632-48398053 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 157 |
| Conread position: | 2-578 |
| Cow position: | chr16:40333710-40333130 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 145 |
| Conread position: | 3-454 |
| Cow position: | chr16:48370334-48369878 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 148 |
| Conread position: | 5-559 |
| Cow position: | chr16:38709206-38708650 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 115 |
| Conread position: | 7-421 |
| Cow position: | chr16:52789683-52790093 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 19 |
| Conread position: | 38-559 |
| Cow position: | chr16:48096115-48095583 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 62 |
| Conread position: | 46-554 |
| Cow position: | chr16:7504755-7505260 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 115 |
| Conread position: | 49-584 |
| Cow position: | chr16:935804-935243 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 370 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 46, 260 |
| Conread position: | 62-566 |
| Cow position: | chr16:23730265-23729725 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 105 |
| Conread position: | 64-576 |
| Cow position: | chr16:48956479-48957002 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 97 |
| Conread position: | 95-575 |
| Cow position: | chr16:13689368-13689865 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 111-559 |
| Cow position: | chr16:14106366-14106830 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 110 |
| Conread position: | 127-559 |
| Cow position: | chr16:45813953-45813512 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 129-397 |
| Cow position: | chr16:12488880-12489149 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 129-401 |
| Cow position: | chr16:39417368-39417102 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 192, 28 |
| Conread position: | 130-430 |
| Cow position: | chr16:42777705-42778011 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 173 |
| Conread position: | 132-558 |
| Cow position: | chr16:50873430-50873004 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 298 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 88, 26 |
| Conread position: | 132-586 |
| Cow position: | chr16:26649889-26649424 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 26 |
| Conread position: | 133-559 |
| Cow position: | chr16:238006-238452 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 347 |
| Conread position: | 141-499 |
| Cow position: | chr16:50282678-50282315 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 76 |
| Conread position: | 141-507 |
| Cow position: | chr16:11806435-11806799 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 180, 17 |
| Conread position: | 141-558 |
| Cow position: | chr16:25839364-25839796 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 148-397 |
| Cow position: | chr16:35168485-35168744 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 156-559 |
| Cow position: | chr16:10552918-10552505 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 94 |
| Conread position: | 171-395 |
| Cow position: | chr16:54679450-54679681 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 171-558 |
| Cow position: | chr16:45677069-45676689 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 276 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 150, 54 |
| Conread position: | 187-559 |
| Cow position: | chr16:45677774-45678163 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 108 |
| Conread position: | 197-572 |
| Cow position: | chr16:46433514-46433125 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 222-572 |
| Cow position: | chr16:31079266-31078904 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 285-577 |
| Cow position: | chr16:40514587-40514289 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 325-578 |
| Cow position: | chr16:20824420-20824682 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 109, 20 |
Show alignments to all cow chromosomes.