Cow genome map
| Conread name: | Pig4-TMW8065G24 |
| Conread position: | 1-415 |
| Cow position: | chr3:49793000-49793403 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 160 |
| Conread position: | 1-514 |
| Cow position: | chr3:70566151-70565630 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 227 |
| Conread position: | 1-564 |
| Cow position: | chr3:23169483-23168902 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 404 |
| Conread position: | 1-575 |
| Cow position: | chr3:50768262-50768856 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 164 |
| Conread position: | 1-578 |
| Cow position: | chr3:75479606-75480179 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 26 |
| Conread position: | 2-501 |
| Cow position: | chr3:16752659-16752165 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 153 |
| Conread position: | 3-400 |
| Cow position: | chr3:49218719-49218322 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 159 |
| Conread position: | 3-583 |
| Cow position: | chr3:45881494-45882085 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 236 |
| Conread position: | 3-584 |
| Cow position: | chr3:49327536-49328120 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 66 |
| Conread position: | 4-559 |
| Cow position: | chr3:7338186-7337626 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 7 |
| Conread position: | 4-559 |
| Cow position: | chr3:61225151-61224588 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 11-501 |
| Cow position: | chr3:55272435-55271951 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 58 |
| Conread position: | 17-400 |
| Cow position: | chr3:48269466-48269857 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 295 |
| Conread position: | 30-447 |
| Cow position: | chr3:10346963-10347393 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 213 |
| Conread position: | 32-572 |
| Cow position: | chr3:53221646-53222186 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 71 |
| Conread position: | 34-577 |
| Cow position: | chr3:13352980-13353545 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 138 |
| Conread position: | 49-586 |
| Cow position: | chr3:53429253-53428730 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 165 |
| Conread position: | 50-558 |
| Cow position: | chr3:55190109-55189590 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 23 |
| Conread position: | 58-558 |
| Cow position: | chr3:53149970-53150493 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 168 |
| Conread position: | 61-506 |
| Cow position: | chr3:83442232-83441795 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 72-500 |
| Cow position: | chr3:80071775-80072223 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 89 |
| Conread position: | 80-578 |
| Cow position: | chr3:78076858-78077370 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 241 |
| Conread position: | 86-558 |
| Cow position: | chr3:2397111-2396635 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 247 |
| Conread position: | 110-555 |
| Cow position: | chr3:59611017-59610562 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 52 |
| Conread position: | 118-559 |
| Cow position: | chr3:74533055-74533495 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 177 |
| Conread position: | 120-450 |
| Cow position: | chr3:56059516-56059856 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 97 |
| Conread position: | 120-572 |
| Cow position: | chr3:9641273-9641729 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 101 |
| Conread position: | 120-572 |
| Cow position: | chr3:68881400-68880957 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 53 |
| Conread position: | 121-559 |
| Cow position: | chr3:68708291-68707861 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 52 |
| Conread position: | 124-541 |
| Cow position: | chr3:71161507-71161933 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 152, 119 |
| Conread position: | 125-559 |
| Cow position: | chr3:39970158-39969702 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 126-578 |
| Cow position: | chr3:52607893-52608357 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 268 |
| Conread position: | 127-572 |
| Cow position: | chr3:23408626-23408190 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 128, 31 |
| Conread position: | 130-559 |
| Cow position: | chr3:17456550-17456106 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 146, 197 |
| Conread position: | 133-554 |
| Cow position: | chr3:68627953-68627531 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 213, 87 |
| Conread position: | 136-572 |
| Cow position: | chr3:7331394-7330964 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 293 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 29, 206 |
| Conread position: | 149-577 |
| Cow position: | chr3:75080504-75080932 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 169 |
| Conread position: | 160-577 |
| Cow position: | chr3:44932257-44932692 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 297 |
| Conread position: | 161-559 |
| Cow position: | chr3:78092756-78092350 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 186, 24 |
| Conread position: | 162-586 |
| Cow position: | chr3:63315882-63316316 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 114, 300 |
| Conread position: | 163-572 |
| Cow position: | chr3:43233255-43233677 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 315 |
| Conread position: | 171-576 |
| Cow position: | chr3:12705799-12705369 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 49, 260 |
| Conread position: | 176-494 |
| Cow position: | chr3:17447843-17447526 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 170, 56 |
| Conread position: | 184-514 |
| Cow position: | chr3:15506220-15506560 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 144, 182 |
| Conread position: | 187-586 |
| Cow position: | chr3:74754105-74754503 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 155, 30 |
| Conread position: | 197-586 |
| Cow position: | chr3:60264931-60264533 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 201-450 |
| Cow position: | chr3:27697193-27696933 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 209-576 |
| Cow position: | chr3:54506502-54506884 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 113 |
| Conread position: | 230-521 |
| Cow position: | chr3:20678020-20677726 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 72 |
| Conread position: | 237-577 |
| Cow position: | chr3:36418644-36418307 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 82, 67 |
| Conread position: | 252-501 |
| Cow position: | chr3:53508458-53508705 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 171, 74 |
| Conread position: | 258-554 |
| Cow position: | chr3:19585704-19586020 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 176 |
| Conread position: | 297-578 |
| Cow position: | chr3:59604732-59605022 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 340-563 |
| Cow position: | chr3:18607601-18607828 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 133 |
| Conread position: | 343-561 |
| Cow position: | chr3:75608435-75608651 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 5 |
Show alignments to all cow chromosomes.