Cow genome map
| Conread name: | Pig4-TMW8065G24 |
| Conread position: | 1-454 |
| Cow position: | chr5:46510232-46509766 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 246 |
| Conread position: | 1-486 |
| Cow position: | chr5:15598597-15598107 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 86 |
| Conread position: | 1-554 |
| Cow position: | chr5:56523810-56524369 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 160 |
| Conread position: | 1-555 |
| Cow position: | chr5:3582213-3582763 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 164 |
| Conread position: | 1-559 |
| Cow position: | chr5:14314159-14314728 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 80 |
| Conread position: | 1-576 |
| Cow position: | chr5:64321390-64321990 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 37 |
| Conread position: | 1-577 |
| Cow position: | chr5:21617101-21617684 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 68 |
| Conread position: | 1-577 |
| Cow position: | chr5:57935475-57934889 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 19 |
| Conread position: | 1-578 |
| Cow position: | chr5:45846055-45845459 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 3-479 |
| Cow position: | chr5:50821426-50821907 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 203 |
| Conread position: | 4-397 |
| Cow position: | chr5:34915783-34916170 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 23 |
| Conread position: | 11-555 |
| Cow position: | chr5:74644013-74643476 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 47 |
| Conread position: | 11-559 |
| Cow position: | chr5:50599712-50600258 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 150 |
| Conread position: | 11-576 |
| Cow position: | chr5:17087377-17086788 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 15 |
| Conread position: | 13-577 |
| Cow position: | chr5:22737753-22738327 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 186 |
| Conread position: | 16-495 |
| Cow position: | chr5:8821341-8820874 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 88 |
| Conread position: | 17-559 |
| Cow position: | chr5:27154676-27155214 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 86 |
| Conread position: | 39-559 |
| Cow position: | chr5:68718564-68719079 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 349 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 167, 70 |
| Conread position: | 51-581 |
| Cow position: | chr5:65941566-65941014 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 58-556 |
| Cow position: | chr5:65752552-65753069 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 89 |
| Conread position: | 99-461 |
| Cow position: | chr5:64139297-64139666 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 117-559 |
| Cow position: | chr5:40109256-40109696 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 92 |
| Conread position: | 119-394 |
| Cow position: | chr5:67243681-67243957 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 186 |
| Conread position: | 120-397 |
| Cow position: | chr5:43929976-43929696 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 199, 107 |
| Conread position: | 124-559 |
| Cow position: | chr5:30253507-30253952 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 34 |
| Conread position: | 128-586 |
| Cow position: | chr5:24996458-24995980 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 50 |
| Conread position: | 131-571 |
| Cow position: | chr5:64137020-64137482 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 149, 112 |
| Conread position: | 133-577 |
| Cow position: | chr5:56070624-56071089 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 34 |
| Conread position: | 137-559 |
| Cow position: | chr5:64176346-64175918 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 202 |
| Conread position: | 145-397 |
| Cow position: | chr5:60126156-60126412 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 176, 76 |
| Conread position: | 167-559 |
| Cow position: | chr5:44447082-44446663 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 57, 347 |
| Conread position: | 167-585 |
| Cow position: | chr5:34561813-34562249 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 376 |
| Conread position: | 178-577 |
| Cow position: | chr5:46512951-46512538 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 281 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 184-541 |
| Cow position: | chr5:44028480-44028111 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 196-572 |
| Cow position: | chr5:30629324-30628928 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 124, 29 |
| Conread position: | 206-577 |
| Cow position: | chr5:42050391-42050774 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 127, 114 |
| Conread position: | 209-564 |
| Cow position: | chr5:12673618-12673263 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 215-451 |
| Cow position: | chr5:63865644-63865891 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 222-579 |
| Cow position: | chr5:70952020-70951661 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 99, 204 |
| Conread position: | 229-577 |
| Cow position: | chr5:60016029-60016394 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 232-430 |
| Cow position: | chr5:991332-991536 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 234-578 |
| Cow position: | chr5:56877356-56877701 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 249-559 |
| Cow position: | chr5:22666976-22667282 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 183, 80 |
| Conread position: | 255-531 |
| Cow position: | chr5:60183690-60183984 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 343-572 |
| Cow position: | chr5:69099705-69099944 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 355-559 |
| Cow position: | chr5:50824589-50824795 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 152 |
Show alignments to all cow chromosomes.