Cow genome map
| Conread name: | Pig4-TMW8065G24 |
| Conread position: | 1-415 |
| Cow position: | chr6:49411029-49410626 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 1-428 |
| Cow position: | chr6:18961870-18961432 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 82 |
| Conread position: | 1-558 |
| Cow position: | chr6:32867556-32866997 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 229 |
| Conread position: | 1-559 |
| Cow position: | chr6:11192800-11192255 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 1-572 |
| Cow position: | chr6:46465478-46466055 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 240 |
| Conread position: | 2-397 |
| Cow position: | chr6:24961818-24962196 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 338, 67 |
| Conread position: | 2-578 |
| Cow position: | chr6:52478791-52478169 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 609 |
| Conread position: | 3-574 |
| Cow position: | chr6:10106348-10105743 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 576 |
| Conread position: | 4-555 |
| Cow position: | chr6:65870678-65871252 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 55 |
| Conread position: | 31-555 |
| Cow position: | chr6:13688129-13687595 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 31 |
| Conread position: | 40-558 |
| Cow position: | chr6:32121600-32122119 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 188 |
| Conread position: | 55-559 |
| Cow position: | chr6:61489051-61489545 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 331 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 106-559 |
| Cow position: | chr6:38853903-38853431 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 192 |
| Conread position: | 110-547 |
| Cow position: | chr6:26915092-26915541 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 115 |
| Conread position: | 112-479 |
| Cow position: | chr6:20098203-20097821 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 116 |
| Conread position: | 113-559 |
| Cow position: | chr6:46860403-46859945 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 117-421 |
| Cow position: | chr6:21542089-21542400 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 204, 119 |
| Conread position: | 121-559 |
| Cow position: | chr6:36202601-36203046 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 104 |
| Conread position: | 121-562 |
| Cow position: | chr6:51581486-51581027 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 358 |
| Conread position: | 121-575 |
| Cow position: | chr6:15301044-15300599 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 302 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 90, 108 |
| Conread position: | 123-486 |
| Cow position: | chr6:35613634-35613272 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 262 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 216, 35 |
| Conread position: | 131-406 |
| Cow position: | chr6:6460325-6460604 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 33 |
| Conread position: | 131-559 |
| Cow position: | chr6:8965873-8966313 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 35 |
| Conread position: | 136-387 |
| Cow position: | chr6:24515405-24515155 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 206, 91 |
| Conread position: | 136-577 |
| Cow position: | chr6:53025010-53024568 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 292 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 145-494 |
| Cow position: | chr6:6400745-6401103 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 79, 116 |
| Conread position: | 147-572 |
| Cow position: | chr6:21231335-21231749 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 210, 84 |
| Conread position: | 153-558 |
| Cow position: | chr6:63720004-63720416 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 168, 74 |
| Conread position: | 166-586 |
| Cow position: | chr6:47574723-47575142 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 66 |
| Conread position: | 171-426 |
| Cow position: | chr6:1499461-1499725 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 150, 79 |
| Conread position: | 181-479 |
| Cow position: | chr6:47640604-47640294 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 127, 114 |
| Conread position: | 185-506 |
| Cow position: | chr6:15243088-15243418 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 313 |
| Conread position: | 186-430 |
| Cow position: | chr6:12543095-12542844 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 135, 44 |
| Conread position: | 193-454 |
| Cow position: | chr6:61608352-61608625 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 230-501 |
| Cow position: | chr6:50975936-50976208 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 200, 130 |
| Conread position: | 236-514 |
| Cow position: | chr6:58597620-58597335 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 261 |
| Conread position: | 244-586 |
| Cow position: | chr6:59603315-59602965 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 337-555 |
| Cow position: | chr6:34119361-34119142 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 83 |
Show alignments to all cow chromosomes.