Cow genome map
| Conread name: | Pla1-C0000030_A15 |
| Conread position: | 41-146 |
| Cow position: | chr10:31005872-31005767 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-148 |
| Cow position: | chr10:34661078-34660971 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 43-148 |
| Cow position: | chr10:33664961-33665065 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 43-160 |
| Cow position: | chr10:63954941-63955057 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 43-163 |
| Cow position: | chr10:28775281-28775404 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 43-245 |
| Cow position: | chr10:31533888-31534092 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 98 |
| Conread position: | 134-320 |
| Cow position: | chr10:50016908-50016731 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 140-464 |
| Cow position: | chr10:24296990-24296671 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 141-464 |
| Cow position: | chr10:4710810-4711122 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 141-464 |
| Cow position: | chr10:26732486-26732159 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 143-374 |
| Cow position: | chr10:42214360-42214589 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 143-445 |
| Cow position: | chr10:30456690-30456389 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 153 |
| Conread position: | 143-463 |
| Cow position: | chr10:15888461-15888779 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 143-463 |
| Cow position: | chr10:55096545-55096860 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 143-464 |
| Cow position: | chr10:37908665-37908343 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 143-464 |
| Cow position: | chr10:48384748-48384431 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 147-461 |
| Cow position: | chr10:51836990-51836675 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 147-464 |
| Cow position: | chr10:17836704-17836395 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 161-301 |
| Cow position: | chr10:39811007-39810869 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-316 |
| Cow position: | chr10:17223021-17223174 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-319 |
| Cow position: | chr10:48373944-48373786 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 131 |
| Conread position: | 161-336 |
| Cow position: | chr10:11216465-11216296 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-394 |
| Cow position: | chr10:60936151-60936381 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 161-397 |
| Cow position: | chr10:54928437-54928203 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 161-443 |
| Cow position: | chr10:10023469-10023742 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr10:7894945-7894644 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr10:10173406-10173689 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr10:21729199-21728897 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 131 |
| Conread position: | 161-463 |
| Cow position: | chr10:26291984-26291683 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 161-463 |
| Cow position: | chr10:30720199-30720499 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr10:32365443-32365743 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 161-463 |
| Cow position: | chr10:33933820-33933519 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 42 |
| Conread position: | 161-463 |
| Cow position: | chr10:37125713-37125415 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr10:38397253-38396947 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 49 |
| Conread position: | 161-463 |
| Cow position: | chr10:39211276-39211577 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 42 |
| Conread position: | 161-463 |
| Cow position: | chr10:39648467-39648167 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr10:47084530-47084831 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 161-463 |
| Cow position: | chr10:50087216-50086915 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 161-463 |
| Cow position: | chr10:52826125-52825825 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-464 |
| Cow position: | chr10:9799014-9798713 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 50 |
| Conread position: | 161-464 |
| Cow position: | chr10:14964064-14963760 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 42 |
| Conread position: | 161-464 |
| Cow position: | chr10:16646808-16646501 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 135 |
| Conread position: | 161-464 |
| Cow position: | chr10:31527201-31527497 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 42 |
| Conread position: | 161-464 |
| Cow position: | chr10:38013545-38013849 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 129 |
| Conread position: | 161-464 |
| Cow position: | chr10:38273621-38273926 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 161-464 |
| Cow position: | chr10:39139166-39139465 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 161-464 |
| Cow position: | chr10:39940142-39939842 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 161-464 |
| Cow position: | chr10:42745091-42745391 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 19 |
| Conread position: | 161-464 |
| Cow position: | chr10:43288877-43288582 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 161-464 |
| Cow position: | chr10:43489131-43489432 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-464 |
| Cow position: | chr10:44203196-44202908 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 181, 74 |
| Conread position: | 161-464 |
| Cow position: | chr10:44785792-44786093 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-464 |
| Cow position: | chr10:50110703-50110410 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 42 |
| Conread position: | 161-464 |
| Cow position: | chr10:54798941-54799243 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 42 |
| Conread position: | 163-463 |
| Cow position: | chr10:11682357-11682058 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 40 |
Show alignments to all cow chromosomes.