Cow genome map
Conread name: | Pla1-C0000030_A15 |
Conread position: | 139-463 |
Cow position: | chr11:63652526-63652207 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 141-463 |
Cow position: | chr11:62009683-62009359 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 66 |
Conread position: | 141-464 |
Cow position: | chr11:30164692-30164993 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 12 |
Conread position: | 143-279 |
Cow position: | chr11:3496166-3496302 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 103 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 143-463 |
Cow position: | chr11:2293937-2293618 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 143-464 |
Cow position: | chr11:25564875-25565190 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 144-446 |
Cow position: | chr11:8246307-8246609 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 148 |
Conread position: | 144-464 |
Cow position: | chr11:30255562-30255878 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 60 |
Conread position: | 146-464 |
Cow position: | chr11:9432499-9432817 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 59 |
Conread position: | 147-464 |
Cow position: | chr11:70602155-70601841 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 150-408 |
Cow position: | chr11:24045626-24045374 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 136 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 154-463 |
Cow position: | chr11:75402387-75402087 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 156-461 |
Cow position: | chr11:23773396-23773694 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 157-463 |
Cow position: | chr11:29614487-29614788 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 47 |
Conread position: | 160-463 |
Cow position: | chr11:2350660-2350960 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 161-311 |
Cow position: | chr11:26067968-26067813 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 39, 137 |
Conread position: | 161-318 |
Cow position: | chr11:32068114-32067958 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 64, 40 |
Conread position: | 161-338 |
Cow position: | chr11:62881493-62881322 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 129 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 161-349 |
Cow position: | chr11:84723318-84723505 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 152 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 50, 71 |
Conread position: | 161-358 |
Cow position: | chr11:57625048-57624850 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 162 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 79, 42 |
Conread position: | 161-387 |
Cow position: | chr11:35241737-35241517 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 161-407 |
Cow position: | chr11:47757846-47757595 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 133 |
Conread position: | 161-408 |
Cow position: | chr11:18116496-18116741 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 42 |
Conread position: | 161-418 |
Cow position: | chr11:67453795-67454050 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-424 |
Cow position: | chr11:2285855-2286116 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-445 |
Cow position: | chr11:41178093-41178375 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 130 |
Conread position: | 161-461 |
Cow position: | chr11:2421609-2421907 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-461 |
Cow position: | chr11:10851255-10851554 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 42 |
Conread position: | 161-461 |
Cow position: | chr11:50282268-50281966 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 42 |
Conread position: | 161-462 |
Cow position: | chr11:10100190-10100489 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:1268363-1268063 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:2772480-2772778 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:4734425-4734725 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:8366702-8367002 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:10043386-10043686 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:10698604-10698307 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:15047601-15047899 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:17104564-17104264 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:22617804-22617504 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:26592635-26592336 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:34638362-34638062 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:35142190-35141894 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 161-463 |
Cow position: | chr11:40139429-40139133 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 42 |
Conread position: | 161-463 |
Cow position: | chr11:41314437-41314737 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:47972710-47972426 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:52846617-52846917 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:58136859-58137153 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:72050120-72050422 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 42 |
Conread position: | 161-463 |
Cow position: | chr11:83001171-83001470 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr11:84967250-84967550 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-464 |
Cow position: | chr11:13087525-13087224 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-464 |
Cow position: | chr11:21853109-21852801 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 135 |
Conread position: | 161-464 |
Cow position: | chr11:27906472-27906764 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 42 |
Conread position: | 161-464 |
Cow position: | chr11:31236261-31235962 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 50 |
Conread position: | 161-464 |
Cow position: | chr11:31865778-31866093 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 42 |
Conread position: | 161-464 |
Cow position: | chr11:36930392-36930092 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 42 |
Conread position: | 161-464 |
Cow position: | chr11:40300625-40300327 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-464 |
Cow position: | chr11:62792036-62792334 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-464 |
Cow position: | chr11:71078565-71078865 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 131 |
Conread position: | 161-464 |
Cow position: | chr11:81576540-81576244 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 162-320 |
Cow position: | chr11:8499209-8499361 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 163-464 |
Cow position: | chr11:17279463-17279154 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 90 |
Conread position: | 164-461 |
Cow position: | chr11:38235625-38235340 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 168-336 |
Cow position: | chr11:42017732-42017569 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 11, 95 |
Show alignments to all cow chromosomes.