Cow genome map

Conread name: Pla1-C0000030_A15

Conread position: 139-463
Cow position: chr11:63652526-63652207 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 141-463
Cow position: chr11:62009683-62009359 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 66

Conread position: 141-464
Cow position: chr11:30164692-30164993 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 143-279
Cow position: chr11:3496166-3496302 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 61

Conread position: 143-463
Cow position: chr11:2293937-2293618 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-464
Cow position: chr11:25564875-25565190 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 144-446
Cow position: chr11:8246307-8246609 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 148

Conread position: 144-464
Cow position: chr11:30255562-30255878 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 146-464
Cow position: chr11:9432499-9432817 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 59

Conread position: 147-464
Cow position: chr11:70602155-70601841 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 150-408
Cow position: chr11:24045626-24045374 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 154-463
Cow position: chr11:75402387-75402087 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 156-461
Cow position: chr11:23773396-23773694 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 157-463
Cow position: chr11:29614487-29614788 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 47

Conread position: 160-463
Cow position: chr11:2350660-2350960 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 161-311
Cow position: chr11:26067968-26067813 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 137

Conread position: 161-318
Cow position: chr11:32068114-32067958 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 40

Conread position: 161-338
Cow position: chr11:62881493-62881322 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 161-349
Cow position: chr11:84723318-84723505 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 71

Conread position: 161-358
Cow position: chr11:57625048-57624850 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 42

Conread position: 161-387
Cow position: chr11:35241737-35241517 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 161-407
Cow position: chr11:47757846-47757595 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 133

Conread position: 161-408
Cow position: chr11:18116496-18116741 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 42

Conread position: 161-418
Cow position: chr11:67453795-67454050 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-424
Cow position: chr11:2285855-2286116 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-445
Cow position: chr11:41178093-41178375 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 130

Conread position: 161-461
Cow position: chr11:2421609-2421907 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chr11:10851255-10851554 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-461
Cow position: chr11:50282268-50281966 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 42

Conread position: 161-462
Cow position: chr11:10100190-10100489 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:1268363-1268063 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:2772480-2772778 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:4734425-4734725 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:8366702-8367002 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:10043386-10043686 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:10698604-10698307 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:15047601-15047899 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:17104564-17104264 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:22617804-22617504 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:26592635-26592336 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:34638362-34638062 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:35142190-35141894 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr11:40139429-40139133 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 42

Conread position: 161-463
Cow position: chr11:41314437-41314737 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:47972710-47972426 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:52846617-52846917 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:58136859-58137153 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:72050120-72050422 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 42

Conread position: 161-463
Cow position: chr11:83001171-83001470 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:84967250-84967550 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr11:13087525-13087224 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr11:21853109-21852801 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 135

Conread position: 161-464
Cow position: chr11:27906472-27906764 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 42

Conread position: 161-464
Cow position: chr11:31236261-31235962 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 50

Conread position: 161-464
Cow position: chr11:31865778-31866093 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 42

Conread position: 161-464
Cow position: chr11:36930392-36930092 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 42

Conread position: 161-464
Cow position: chr11:40300625-40300327 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr11:62792036-62792334 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr11:71078565-71078865 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 131

Conread position: 161-464
Cow position: chr11:81576540-81576244 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 162-320
Cow position: chr11:8499209-8499361 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 163-464
Cow position: chr11:17279463-17279154 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 90

Conread position: 164-461
Cow position: chr11:38235625-38235340 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 168-336
Cow position: chr11:42017732-42017569 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 95

Show alignments to all cow chromosomes.