Cow genome map

Conread name: Pla1-C0000030_A15

Conread position: 40-464
Cow position: chr12:1345442-1345847 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 111

Conread position: 42-215
Cow position: chr12:33296996-33297165 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 108

Conread position: 139-463
Cow position: chr12:10359100-10359419 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 143-427
Cow position: chr12:42604777-42604495 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 143-457
Cow position: chr12:21212189-21212502 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-464
Cow position: chr12:8172312-8172631 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 10

Conread position: 160-320
Cow position: chr12:26869832-26869670 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 134

Conread position: 161-282
Cow position: chr12:35547710-35547590 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 161-301
Cow position: chr12:36149248-36149110 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 161-339
Cow position: chr12:24756123-24755944 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 132

Conread position: 161-406
Cow position: chr12:1093325-1093568 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 64

Conread position: 161-418
Cow position: chr12:15939453-15939201 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 161-444
Cow position: chr12:38774514-38774783 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 264, 61

Conread position: 161-460
Cow position: chr12:15821146-15821439 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chr12:3070283-3070582 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 132

Conread position: 161-461
Cow position: chr12:31868843-31869136 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 50

Conread position: 161-463
Cow position: chr12:465185-464885 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:1056083-1055784 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 161-463
Cow position: chr12:3545077-3545377 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:5110639-5110345 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:8542450-8542154 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 161-463
Cow position: chr12:8839679-8839979 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:10076083-10076383 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:13042816-13042515 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr12:14940390-14940690 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:15720141-15719845 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:15925328-15925028 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:21579361-21579062 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 42

Conread position: 161-463
Cow position: chr12:21665561-21665863 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr12:22517429-22517124 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 134

Conread position: 161-463
Cow position: chr12:25265908-25265611 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:28012806-28012506 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:32147204-32146905 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:34176980-34177280 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:38893789-38894088 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:43533512-43533812 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr12:6186724-6186427 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 161-464
Cow position: chr12:7651409-7651114 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 161-464
Cow position: chr12:21946414-21946707 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 39

Conread position: 161-464
Cow position: chr12:22594179-22594473 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 161-464
Cow position: chr12:37698048-37697751 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 162-463
Cow position: chr12:4965411-4965112 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 162-464
Cow position: chr12:5226660-5226955 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 163-464
Cow position: chr12:30011539-30011245 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 163-464
Cow position: chr12:30016646-30016352 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 166-464
Cow position: chr12:9886579-9886281 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 37

Show alignments to all cow chromosomes.