Cow genome map
Conread name: | Pla1-C0000030_A15 |
Conread position: | 40-464 |
Cow position: | chr12:1345442-1345847 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 111 |
Conread position: | 42-215 |
Cow position: | chr12:33296996-33297165 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 126 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 131, 108 |
Conread position: | 139-463 |
Cow position: | chr12:10359100-10359419 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 143-427 |
Cow position: | chr12:42604777-42604495 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 143-457 |
Cow position: | chr12:21212189-21212502 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 143-464 |
Cow position: | chr12:8172312-8172631 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 10 |
Conread position: | 160-320 |
Cow position: | chr12:26869832-26869670 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 129 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 50, 134 |
Conread position: | 161-282 |
Cow position: | chr12:35547710-35547590 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-301 |
Cow position: | chr12:36149248-36149110 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-339 |
Cow position: | chr12:24756123-24755944 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 147 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 46, 132 |
Conread position: | 161-406 |
Cow position: | chr12:1093325-1093568 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 64 |
Conread position: | 161-418 |
Cow position: | chr12:15939453-15939201 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 161-444 |
Cow position: | chr12:38774514-38774783 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 210 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 264, 61 |
Conread position: | 161-460 |
Cow position: | chr12:15821146-15821439 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-461 |
Cow position: | chr12:3070283-3070582 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 132 |
Conread position: | 161-461 |
Cow position: | chr12:31868843-31869136 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 195 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 103, 50 |
Conread position: | 161-463 |
Cow position: | chr12:465185-464885 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:1056083-1055784 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 161-463 |
Cow position: | chr12:3545077-3545377 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:5110639-5110345 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:8542450-8542154 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 161-463 |
Cow position: | chr12:8839679-8839979 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:10076083-10076383 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:13042816-13042515 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 42 |
Conread position: | 161-463 |
Cow position: | chr12:14940390-14940690 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:15720141-15719845 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:15925328-15925028 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:21579361-21579062 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 42 |
Conread position: | 161-463 |
Cow position: | chr12:21665561-21665863 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 42 |
Conread position: | 161-463 |
Cow position: | chr12:22517429-22517124 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 134 |
Conread position: | 161-463 |
Cow position: | chr12:25265908-25265611 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:28012806-28012506 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:32147204-32146905 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:34176980-34177280 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:38893789-38894088 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr12:43533512-43533812 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-464 |
Cow position: | chr12:6186724-6186427 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 161-464 |
Cow position: | chr12:7651409-7651114 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 161-464 |
Cow position: | chr12:21946414-21946707 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 39 |
Conread position: | 161-464 |
Cow position: | chr12:22594179-22594473 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 161-464 |
Cow position: | chr12:37698048-37697751 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 162-463 |
Cow position: | chr12:4965411-4965112 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 162-464 |
Cow position: | chr12:5226660-5226955 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 39 |
Conread position: | 163-464 |
Cow position: | chr12:30011539-30011245 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 163-464 |
Cow position: | chr12:30016646-30016352 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 166-464 |
Cow position: | chr12:9886579-9886281 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 37 |
Show alignments to all cow chromosomes.