Cow genome map

Conread name: Pla1-C0000030_A15

Conread position: 42-160
Cow position: chr13:21905754-21905637 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 42-163
Cow position: chr13:44323807-44323687 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 140-464
Cow position: chr13:60489490-60489811 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 143-464
Cow position: chr13:13126530-13126212 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 144-461
Cow position: chr13:12390179-12389863 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 153-462
Cow position: chr13:19565500-19565192 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 155-320
Cow position: chr13:49195160-49195322 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 9

Conread position: 160-320
Cow position: chr13:31510362-31510515 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 161-271
Cow position: chr13:6718947-6718838 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 161-334
Cow position: chr13:60465797-60465626 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 144
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 42, 0

Conread position: 161-356
Cow position: chr13:28700037-28700228 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 158
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 161-364
Cow position: chr13:16248724-16248528 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 161-401
Cow position: chr13:46056159-46056397 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-451
Cow position: chr13:21837080-21836792 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:2725590-2725290 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:5498584-5498288 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-463
Cow position: chr13:6343099-6343399 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:6869524-6869820 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:7402621-7402922 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr13:7870345-7870048 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:8173181-8172882 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:12991391-12991088 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr13:18121654-18121357 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:32081093-32081393 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:35540618-35540918 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:40300530-40300230 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:50112683-50112983 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr13:55337954-55338252 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:58313549-58313849 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr13:561172-560870 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 119

Conread position: 161-464
Cow position: chr13:16807806-16808100 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr13:20571498-20571199 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 113

Conread position: 161-464
Cow position: chr13:26073697-26073405 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr13:34728070-34728373 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 127

Conread position: 161-464
Cow position: chr13:43594047-43594348 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 42

Conread position: 161-464
Cow position: chr13:60646369-60646067 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-464
Cow position: chr13:60967561-60967268 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 39

Conread position: 162-463
Cow position: chr13:36672885-36673185 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 41

Conread position: 162-463
Cow position: chr13:39911616-39911913 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 163-464
Cow position: chr13:34905366-34905076 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 166-340
Cow position: chr13:12572222-12572050 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 176-445
Cow position: chr13:38013429-38013167 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 189-446
Cow position: chr13:41337439-41337184 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Show alignments to all cow chromosomes.