Cow genome map
Conread name: | Pla1-C0000030_A15 |
Conread position: | 32-148 |
Cow position: | chr15:8046538-8046654 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 90 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 42-160 |
Cow position: | chr15:47201543-47201426 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 141-407 |
Cow position: | chr15:13641157-13641423 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 151 |
Conread position: | 141-464 |
Cow position: | chr15:13076590-13076916 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 12 |
Conread position: | 141-464 |
Cow position: | chr15:18214633-18214960 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 156 |
Conread position: | 143-320 |
Cow position: | chr15:29007274-29007099 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 136 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 22, 9 |
Conread position: | 143-463 |
Cow position: | chr15:25165032-25164713 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 143-463 |
Cow position: | chr15:36940311-36939992 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 143-464 |
Cow position: | chr15:60689-61014 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 144-320 |
Cow position: | chr15:6488840-6489015 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 19, 88 |
Conread position: | 144-463 |
Cow position: | chr15:12442598-12442917 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 60 |
Conread position: | 148-464 |
Cow position: | chr15:17193481-17193166 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 55 |
Conread position: | 153-400 |
Cow position: | chr15:4953403-4953647 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 185 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 10, 49 |
Conread position: | 153-463 |
Cow position: | chr15:25203890-25203581 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 51 |
Conread position: | 160-461 |
Cow position: | chr15:45292408-45292705 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 43 |
Conread position: | 160-462 |
Cow position: | chr15:2644258-2643958 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 160-464 |
Cow position: | chr15:8576239-8576544 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 43 |
Conread position: | 161-282 |
Cow position: | chr15:20647255-20647375 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-298 |
Cow position: | chr15:33335555-33335690 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-299 |
Cow position: | chr15:3276387-3276251 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-310 |
Cow position: | chr15:3272808-3272662 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 110 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-318 |
Cow position: | chr15:6367399-6367244 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 161-336 |
Cow position: | chr15:4629155-4628976 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 136 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 42, 134 |
Conread position: | 161-366 |
Cow position: | chr15:8001473-8001273 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 160 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 161-374 |
Cow position: | chr15:39407183-39406966 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 135 |
Conread position: | 161-418 |
Cow position: | chr15:4918197-4918455 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 71 |
Conread position: | 161-436 |
Cow position: | chr15:42940001-42940272 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 161-437 |
Cow position: | chr15:4689124-4689394 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 50 |
Conread position: | 161-460 |
Cow position: | chr15:43247895-43248177 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 209 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 68, 49 |
Conread position: | 161-461 |
Cow position: | chr15:6158275-6158569 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr15:29217-28918 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr15:442698-442399 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr15:481670-481954 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 221 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 161-463 |
Cow position: | chr15:5020453-5020751 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr15:6563983-6564293 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 42 |
Conread position: | 161-463 |
Cow position: | chr15:9620310-9620009 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 161-463 |
Cow position: | chr15:11596291-11595991 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr15:20404592-20404292 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr15:25133053-25133353 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr15:31768459-31768160 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr15:49191475-49191175 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr15:50151790-50152091 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 42 |
Conread position: | 161-463 |
Cow position: | chr15:52208406-52208106 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-464 |
Cow position: | chr15:609026-608738 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 39 |
Conread position: | 161-464 |
Cow position: | chr15:21533046-21532747 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 42 |
Conread position: | 161-464 |
Cow position: | chr15:26388878-26388578 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-464 |
Cow position: | chr15:37382498-37382200 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 131 |
Conread position: | 161-464 |
Cow position: | chr15:42727465-42727763 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-464 |
Cow position: | chr15:47201484-47201170 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 42 |
Conread position: | 161-464 |
Cow position: | chr15:50344644-50344344 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 129 |
Conread position: | 162-463 |
Cow position: | chr15:5640499-5640200 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 189-463 |
Cow position: | chr15:4082102-4082375 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 189-463 |
Cow position: | chr15:6959814-6960087 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 189-463 |
Cow position: | chr15:21909290-21909019 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 92 |
Conread position: | 190-463 |
Cow position: | chr15:28487024-28486752 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 13 |
Show alignments to all cow chromosomes.