Cow genome map
| Conread name: | Pla1-C0000030_A15 |
| Conread position: | 35-160 |
| Cow position: | chr16:39457062-39457188 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 97, 117 |
| Conread position: | 37-216 |
| Cow position: | chr16:49219274-49219095 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-148 |
| Cow position: | chr16:15369676-15369781 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-157 |
| Cow position: | chr16:15187749-15187863 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-166 |
| Cow position: | chr16:24147337-24147461 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 104, 117 |
| Conread position: | 141-320 |
| Cow position: | chr16:25935465-25935643 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 142-365 |
| Cow position: | chr16:23403535-23403758 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 143-464 |
| Cow position: | chr16:41259-41582 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 144-321 |
| Cow position: | chr16:2408167-2407991 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 147-464 |
| Cow position: | chr16:4712101-4712413 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 153-463 |
| Cow position: | chr16:5345965-5345656 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 153-464 |
| Cow position: | chr16:50190384-50190078 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 154-463 |
| Cow position: | chr16:15349426-15349123 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 161-320 |
| Cow position: | chr16:7541225-7541380 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 161-320 |
| Cow position: | chr16:51400818-51400658 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 161-339 |
| Cow position: | chr16:42074155-42073975 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 125 |
| Conread position: | 161-373 |
| Cow position: | chr16:49742788-49742576 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 133 |
| Conread position: | 161-399 |
| Cow position: | chr16:23563191-23563412 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 161-406 |
| Cow position: | chr16:24228984-24229222 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-453 |
| Cow position: | chr16:702002-702282 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 42 |
| Conread position: | 161-461 |
| Cow position: | chr16:193195-192898 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-461 |
| Cow position: | chr16:1563645-1563346 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 161-461 |
| Cow position: | chr16:20234884-20234589 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 46 |
| Conread position: | 161-463 |
| Cow position: | chr16:5525356-5525058 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr16:6677464-6677760 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr16:7385508-7385808 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr16:13721846-13721545 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 161-463 |
| Cow position: | chr16:15904477-15904178 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 161-463 |
| Cow position: | chr16:16566840-16567140 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr16:18212452-18212152 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr16:19778194-19777894 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 42 |
| Conread position: | 161-463 |
| Cow position: | chr16:22798961-22798670 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr16:23877217-23877517 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr16:24407655-24407955 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr16:27593081-27592781 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr16:45465178-45464877 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 161-464 |
| Cow position: | chr16:7701511-7701819 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 137 |
| Conread position: | 161-464 |
| Cow position: | chr16:10866500-10866800 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-464 |
| Cow position: | chr16:13422181-13421882 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 161-464 |
| Cow position: | chr16:17664860-17665165 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 40 |
| Conread position: | 161-464 |
| Cow position: | chr16:18745297-18744993 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 106 |
| Conread position: | 161-464 |
| Cow position: | chr16:20968144-20967841 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 161-464 |
| Cow position: | chr16:26666447-26666754 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 42 |
| Conread position: | 161-464 |
| Cow position: | chr16:50712696-50712395 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 161-464 |
| Cow position: | chr16:56149526-56149822 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 53 |
| Conread position: | 162-269 |
| Cow position: | chr16:37388058-37387952 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 163-464 |
| Cow position: | chr16:6389911-6389605 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 40 |
Show alignments to all cow chromosomes.