Cow genome map
Conread name: | Pla1-C0000030_A15 |
Conread position: | 43-151 |
Cow position: | chr2:42502445-42502553 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 87 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 43-156 |
Cow position: | chr2:77281096-77281208 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 93 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 43-160 |
Cow position: | chr2:7370585-7370700 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 43-163 |
Cow position: | chr2:76984993-76984872 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 135-316 |
Cow position: | chr2:76560538-76560721 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 144 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 18, 130 |
Conread position: | 141-463 |
Cow position: | chr2:10608841-10608520 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 63 |
Conread position: | 143-463 |
Cow position: | chr2:8529628-8529947 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 143-463 |
Cow position: | chr2:63890283-63889970 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 61 |
Conread position: | 143-463 |
Cow position: | chr2:67682741-67683060 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 153-329 |
Cow position: | chr2:7506617-7506447 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 131 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 10, 51 |
Conread position: | 153-374 |
Cow position: | chr2:104777-104559 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 166 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 10, 49 |
Conread position: | 153-464 |
Cow position: | chr2:30380242-30380552 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 51 |
Conread position: | 157-464 |
Cow position: | chr2:45917798-45917491 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 46 |
Conread position: | 160-464 |
Cow position: | chr2:65930434-65930142 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 43 |
Conread position: | 161-278 |
Cow position: | chr2:31272725-31272609 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-320 |
Cow position: | chr2:36722025-36722176 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-336 |
Cow position: | chr2:59410780-59410607 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 133 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-353 |
Cow position: | chr2:9219939-9219751 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 146 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 170, 109 |
Conread position: | 161-362 |
Cow position: | chr2:62735145-62735344 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 163 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-373 |
Cow position: | chr2:576532-576736 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 165 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-374 |
Cow position: | chr2:7905911-7906118 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 165 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 39, 102 |
Conread position: | 161-374 |
Cow position: | chr2:50431672-50431462 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-378 |
Cow position: | chr2:11002456-11002663 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 173 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-379 |
Cow position: | chr2:5797829-5797612 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 161-388 |
Cow position: | chr2:50565289-50565510 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 174 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 204, 42 |
Conread position: | 161-406 |
Cow position: | chr2:4804763-4804520 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 161-447 |
Cow position: | chr2:2603637-2603922 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 161-454 |
Cow position: | chr2:46265278-46265566 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 42 |
Conread position: | 161-457 |
Cow position: | chr2:18020937-18020643 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 161-457 |
Cow position: | chr2:74469017-74468723 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-458 |
Cow position: | chr2:9042684-9042389 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 50 |
Conread position: | 161-458 |
Cow position: | chr2:70915928-70916219 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 161-461 |
Cow position: | chr2:48534016-48533718 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-462 |
Cow position: | chr2:57938371-57938670 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:825977-825677 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:2212515-2212216 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 161-463 |
Cow position: | chr2:4180141-4179842 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 42 |
Conread position: | 161-463 |
Cow position: | chr2:6945025-6945325 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:11813574-11813273 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 161-463 |
Cow position: | chr2:14938646-14938946 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:17119102-17118803 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:22344994-22345294 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:24423053-24422754 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:37396356-37396656 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 42 |
Conread position: | 161-463 |
Cow position: | chr2:44094341-44094640 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:48721710-48722010 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:53204151-53203849 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 43 |
Conread position: | 161-463 |
Cow position: | chr2:54148263-54148563 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:54740446-54740751 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 46 |
Conread position: | 161-463 |
Cow position: | chr2:55164330-55164031 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:60051493-60051193 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:62731500-62731800 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:62999795-62999495 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr2:77859296-77859594 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 161-463 |
Cow position: | chr2:86508461-86508160 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 161-464 |
Cow position: | chr2:12330900-12331208 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 219 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 135, 208 |
Conread position: | 161-464 |
Cow position: | chr2:16717927-16717632 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 42 |
Conread position: | 161-464 |
Cow position: | chr2:16752921-16752623 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 42 |
Conread position: | 161-464 |
Cow position: | chr2:32417655-32417356 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 48 |
Conread position: | 161-464 |
Cow position: | chr2:35194684-35194983 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-464 |
Cow position: | chr2:37324860-37325160 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 42 |
Conread position: | 161-464 |
Cow position: | chr2:38335351-38335652 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-464 |
Cow position: | chr2:41157154-41157446 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 42 |
Conread position: | 161-464 |
Cow position: | chr2:68191377-68191094 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 55 |
Conread position: | 161-464 |
Cow position: | chr2:85739335-85739643 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 136 |
Conread position: | 162-464 |
Cow position: | chr2:39107228-39107527 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 163-464 |
Cow position: | chr2:209128-208828 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 40 |
Show alignments to all cow chromosomes.