Cow genome map
| Conread name: | Pla1-C0000030_A15 |
| Conread position: | 45-153 |
| Cow position: | chr21:13678172-13678064 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 134-464 |
| Cow position: | chr21:10668749-10668437 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 146-463 |
| Cow position: | chr21:744114-743806 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 147-461 |
| Cow position: | chr21:470884-471196 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 6 |
| Conread position: | 147-464 |
| Cow position: | chr21:1463497-1463809 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 147-464 |
| Cow position: | chr21:22719510-22719198 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 153-463 |
| Cow position: | chr21:3923507-3923816 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 153-464 |
| Cow position: | chr21:18979573-18979279 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 10, 142 |
| Conread position: | 161-299 |
| Cow position: | chr21:451241-451380 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 111, 42 |
| Conread position: | 161-322 |
| Cow position: | chr21:6965867-6965709 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-374 |
| Cow position: | chr21:28428653-28428864 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 63, 12 |
| Conread position: | 161-397 |
| Cow position: | chr21:9010502-9010266 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 161-431 |
| Cow position: | chr21:2419799-2420066 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 161-462 |
| Cow position: | chr21:6623418-6623723 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 161-463 |
| Cow position: | chr21:451482-451779 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 42 |
| Conread position: | 161-463 |
| Cow position: | chr21:4541582-4541282 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr21:7047577-7047280 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr21:11509546-11509842 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr21:23329738-23329438 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr21:30966338-30966038 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr21:34900069-34899780 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr21:39429225-39429524 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr21:39486669-39486369 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-464 |
| Cow position: | chr21:45307-45621 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 135 |
| Conread position: | 161-464 |
| Cow position: | chr21:3766165-3765861 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 132 |
| Conread position: | 161-464 |
| Cow position: | chr21:4559469-4559167 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 161-464 |
| Cow position: | chr21:15546088-15545785 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 130 |
| Conread position: | 161-464 |
| Cow position: | chr21:16278006-16278303 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 86 |
| Conread position: | 161-464 |
| Cow position: | chr21:21216870-21216565 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 137 |
| Conread position: | 161-464 |
| Cow position: | chr21:26829958-26829661 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 136 |
| Conread position: | 161-464 |
| Cow position: | chr21:27864251-27863944 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 39 |
| Conread position: | 161-464 |
| Cow position: | chr21:28476898-28477201 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 161-464 |
| Cow position: | chr21:29214879-29214580 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 166-461 |
| Cow position: | chr21:25156894-25157185 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 37 |
| Conread position: | 171-464 |
| Cow position: | chr21:23605949-23606247 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 127 |
| Conread position: | 175-464 |
| Cow position: | chr21:28839589-28839877 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 187-463 |
| Cow position: | chr21:19613874-19614149 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 190-464 |
| Cow position: | chr21:20107445-20107174 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 190-464 |
| Cow position: | chr21:26852553-26852826 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 193-464 |
| Cow position: | chr21:8071460-8071197 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 10 |
Show alignments to all cow chromosomes.