Cow genome map

Conread name: Pla1-C0000030_A15

Conread position: 40-171
Cow position: chr22:13768648-13768779 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 43-147
Cow position: chr22:34901237-34901341 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-165
Cow position: chr22:12869083-12868964 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 43-245
Cow position: chr22:30963273-30963474 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 98

Conread position: 136-373
Cow position: chr22:25765306-25765071 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 89, 25

Conread position: 139-461
Cow position: chr22:45106717-45106404 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 141-463
Cow position: chr22:16203209-16203525 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 143-464
Cow position: chr22:13897050-13897365 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 144-464
Cow position: chr22:556913-556600 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 150-464
Cow position: chr22:34607899-34608199 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 153-284
Cow position: chr22:24817340-24817211 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 49

Conread position: 160-387
Cow position: chr22:15953577-15953353 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 43

Conread position: 160-399
Cow position: chr22:18188615-18188845 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 161-279
Cow position: chr22:28714331-28714448 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 161-319
Cow position: chr22:44382157-44382313 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 161-321
Cow position: chr22:5331351-5331189 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 48, 132

Conread position: 161-373
Cow position: chr22:34625549-34625753 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 119, 0

Conread position: 161-399
Cow position: chr22:34893981-34894214 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-445
Cow position: chr22:15858210-15858496 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 130

Conread position: 161-454
Cow position: chr22:322391-322109 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 161-460
Cow position: chr22:31645530-31645822 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 58

Conread position: 161-461
Cow position: chr22:6928661-6928957 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 161-461
Cow position: chr22:32894340-32894636 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 161-463
Cow position: chr22:981754-982054 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:3274925-3274627 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:7304070-7303763 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 42

Conread position: 161-463
Cow position: chr22:8299571-8299882 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr22:14807686-14807986 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:19597531-19597236 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 42

Conread position: 161-463
Cow position: chr22:19712957-19712658 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:20237142-20236842 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:22107474-22107774 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:22563101-22563401 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:22607590-22607890 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-463
Cow position: chr22:27306532-27306232 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:28996877-28996577 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:29855281-29855579 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-464
Cow position: chr22:1310511-1310213 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 42

Conread position: 161-464
Cow position: chr22:1325642-1325938 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 131

Conread position: 161-464
Cow position: chr22:5041536-5041844 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 161-464
Cow position: chr22:8417684-8417982 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 161-464
Cow position: chr22:9277230-9277522 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 39

Conread position: 161-464
Cow position: chr22:22022099-22022395 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 161-464
Cow position: chr22:33093770-33094070 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 176-460
Cow position: chr22:12968813-12968531 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 27

Conread position: 188-464
Cow position: chr22:25912171-25912440 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 73

Conread position: 190-464
Cow position: chr22:645482-645222 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 193-463
Cow position: chr22:43949395-43949127 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 193-464
Cow position: chr22:37829855-37829585 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 10

Show alignments to all cow chromosomes.