Cow genome map
Conread name: | Pla1-C0000030_A15 |
Conread position: | 40-171 |
Cow position: | chr22:13768648-13768779 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 100 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 43-147 |
Cow position: | chr22:34901237-34901341 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 84 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 43-165 |
Cow position: | chr22:12869083-12868964 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 43-245 |
Cow position: | chr22:30963273-30963474 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 139 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 142, 98 |
Conread position: | 136-373 |
Cow position: | chr22:25765306-25765071 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 175 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 89, 25 |
Conread position: | 139-461 |
Cow position: | chr22:45106717-45106404 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 14 |
Conread position: | 141-463 |
Cow position: | chr22:16203209-16203525 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 12 |
Conread position: | 143-464 |
Cow position: | chr22:13897050-13897365 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 65 |
Conread position: | 144-464 |
Cow position: | chr22:556913-556600 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 150-464 |
Cow position: | chr22:34607899-34608199 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 153-284 |
Cow position: | chr22:24817340-24817211 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 10, 49 |
Conread position: | 160-387 |
Cow position: | chr22:15953577-15953353 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 43 |
Conread position: | 160-399 |
Cow position: | chr22:18188615-18188845 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 161-279 |
Cow position: | chr22:28714331-28714448 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-319 |
Cow position: | chr22:44382157-44382313 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 125 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-321 |
Cow position: | chr22:5331351-5331189 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 48, 132 |
Conread position: | 161-373 |
Cow position: | chr22:34625549-34625753 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 157 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 161-399 |
Cow position: | chr22:34893981-34894214 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-445 |
Cow position: | chr22:15858210-15858496 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 130 |
Conread position: | 161-454 |
Cow position: | chr22:322391-322109 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 161-460 |
Cow position: | chr22:31645530-31645822 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 58 |
Conread position: | 161-461 |
Cow position: | chr22:6928661-6928957 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 161-461 |
Cow position: | chr22:32894340-32894636 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 42 |
Conread position: | 161-463 |
Cow position: | chr22:981754-982054 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr22:3274925-3274627 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr22:7304070-7303763 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 42 |
Conread position: | 161-463 |
Cow position: | chr22:8299571-8299882 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 42 |
Conread position: | 161-463 |
Cow position: | chr22:14807686-14807986 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr22:19597531-19597236 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 42 |
Conread position: | 161-463 |
Cow position: | chr22:19712957-19712658 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr22:20237142-20236842 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr22:22107474-22107774 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr22:22563101-22563401 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr22:22607590-22607890 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 161-463 |
Cow position: | chr22:27306532-27306232 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr22:28996877-28996577 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 161-463 |
Cow position: | chr22:29855281-29855579 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 42 |
Conread position: | 161-464 |
Cow position: | chr22:1310511-1310213 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 42 |
Conread position: | 161-464 |
Cow position: | chr22:1325642-1325938 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 131 |
Conread position: | 161-464 |
Cow position: | chr22:5041536-5041844 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 134 |
Conread position: | 161-464 |
Cow position: | chr22:8417684-8417982 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 161-464 |
Cow position: | chr22:9277230-9277522 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 39 |
Conread position: | 161-464 |
Cow position: | chr22:22022099-22022395 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 161-464 |
Cow position: | chr22:33093770-33094070 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 176-460 |
Cow position: | chr22:12968813-12968531 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 27 |
Conread position: | 188-464 |
Cow position: | chr22:25912171-25912440 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 73 |
Conread position: | 190-464 |
Cow position: | chr22:645482-645222 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 193-463 |
Cow position: | chr22:43949395-43949127 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 193-464 |
Cow position: | chr22:37829855-37829585 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 10 |
Show alignments to all cow chromosomes.