Cow genome map
| Conread name: | Pla1-C0000030_A15 |
| Conread position: | 42-148 |
| Cow position: | chr25:20075633-20075739 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-463 |
| Cow position: | chr25:18330586-18330257 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 144-329 |
| Cow position: | chr25:6955265-6955448 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 144-463 |
| Cow position: | chr25:17585825-17585501 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 144-463 |
| Cow position: | chr25:36350935-36351253 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 161-340 |
| Cow position: | chr25:19682497-19682680 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 161-382 |
| Cow position: | chr25:9395623-9395846 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 77, 134 |
| Conread position: | 161-443 |
| Cow position: | chr25:26780871-26780591 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-453 |
| Cow position: | chr25:21950340-21950632 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 132 |
| Conread position: | 161-454 |
| Cow position: | chr25:18474413-18474697 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-454 |
| Cow position: | chr25:33838591-33838878 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-459 |
| Cow position: | chr25:20790722-20790411 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 42, 107 |
| Conread position: | 161-461 |
| Cow position: | chr25:20772124-20771824 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 161-463 |
| Cow position: | chr25:3688350-3688650 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr25:4858284-4857983 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 161-463 |
| Cow position: | chr25:8655506-8655804 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr25:13956175-13955875 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr25:17210919-17210620 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr25:17994308-17994008 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr25:19923736-19924034 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr25:32610205-32609905 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr25:34121881-34121579 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 161-463 |
| Cow position: | chr25:34164347-34164047 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr25:35553883-35554183 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-464 |
| Cow position: | chr25:33979194-33978896 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 133 |
| Conread position: | 161-464 |
| Cow position: | chr25:41135533-41135242 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 162-462 |
| Cow position: | chr25:40322074-40321782 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 135, 63 |
| Conread position: | 162-464 |
| Cow position: | chr25:10137030-10137340 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 38 |
| Conread position: | 163-355 |
| Cow position: | chr25:16401674-16401484 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 164-460 |
| Cow position: | chr25:41366930-41366652 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 164-464 |
| Cow position: | chr25:26681795-26682077 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
Show alignments to all cow chromosomes.