Cow genome map
| Conread name: | Pla1-C0000030_A15 |
| Conread position: | 42-156 |
| Cow position: | chr28:22322421-22322533 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 43-160 |
| Cow position: | chr28:29807027-29806911 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 141-402 |
| Cow position: | chr28:17030646-17030376 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 214, 150 |
| Conread position: | 141-429 |
| Cow position: | chr28:8717501-8717219 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 141-463 |
| Cow position: | chr28:15966142-15965822 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 141-463 |
| Cow position: | chr28:18559524-18559204 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 141-463 |
| Cow position: | chr28:28471471-28471789 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 62 |
| Conread position: | 144-373 |
| Cow position: | chr28:25804325-25804553 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 144-464 |
| Cow position: | chr28:4958052-4957727 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 151 |
| Conread position: | 161-290 |
| Cow position: | chr28:21104507-21104379 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-353 |
| Cow position: | chr28:3882315-3882505 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-418 |
| Cow position: | chr28:10303309-10303564 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 161-426 |
| Cow position: | chr28:7059702-7059965 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-454 |
| Cow position: | chr28:22353589-22353873 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 40 |
| Conread position: | 161-461 |
| Cow position: | chr28:23544095-23544387 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:444880-445171 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:1943824-1943524 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:6535326-6535025 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:7830030-7830333 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 42 |
| Conread position: | 161-463 |
| Cow position: | chr28:12117768-12117468 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:13536148-13536448 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:15047680-15047980 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:15917055-15916756 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 161-463 |
| Cow position: | chr28:17369525-17369821 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:22582253-22582553 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:24886332-24886631 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:25828867-25829167 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr28:34581881-34581581 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-464 |
| Cow position: | chr28:5768422-5768721 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 98 |
| Conread position: | 161-464 |
| Cow position: | chr28:7685470-7685157 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 161-464 |
| Cow position: | chr28:10530252-10529946 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 42 |
| Conread position: | 161-464 |
| Cow position: | chr28:19552909-19552612 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 42 |
| Conread position: | 161-464 |
| Cow position: | chr28:23839440-23839733 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-464 |
| Cow position: | chr28:23868710-23869004 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-464 |
| Cow position: | chr28:24671493-24671789 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 132 |
| Conread position: | 162-393 |
| Cow position: | chr28:17314868-17315097 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 163-464 |
| Cow position: | chr28:10772550-10772843 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 40 |
| Conread position: | 166-464 |
| Cow position: | chr28:26923151-26922860 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 175-461 |
| Cow position: | chr28:22322492-22322767 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 190-320 |
| Cow position: | chr28:33369954-33369832 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 190-442 |
| Cow position: | chr28:15973352-15973100 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 235, 101 |
Show alignments to all cow chromosomes.