Cow genome map
| Conread name: | Pla1-C0000030_A15 |
| Conread position: | 38-151 |
| Cow position: | chr6:6471598-6471485 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-157 |
| Cow position: | chr6:917401-917515 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 89 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-230 |
| Cow position: | chr6:1537048-1537232 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 132, 107 |
| Conread position: | 141-464 |
| Cow position: | chr6:32125326-32125650 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 143-464 |
| Cow position: | chr6:2111017-2110713 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 143-464 |
| Cow position: | chr6:50120548-50120233 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 107 |
| Conread position: | 148-464 |
| Cow position: | chr6:47988313-47988613 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 144 |
| Conread position: | 153-463 |
| Cow position: | chr6:40278444-40278753 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 50 |
| Conread position: | 161-317 |
| Cow position: | chr6:21856974-21856820 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-320 |
| Cow position: | chr6:55041767-55041613 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-320 |
| Cow position: | chr6:56926134-56926291 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-320 |
| Cow position: | chr6:60332745-60332903 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 161-320 |
| Cow position: | chr6:64719717-64719873 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 161-326 |
| Cow position: | chr6:49442344-49442508 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 79, 42 |
| Conread position: | 161-387 |
| Cow position: | chr6:227557-227779 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-442 |
| Cow position: | chr6:53543082-53542805 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-443 |
| Cow position: | chr6:51150343-51150623 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-452 |
| Cow position: | chr6:67553633-67553922 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-459 |
| Cow position: | chr6:12352237-12352535 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 132 |
| Conread position: | 161-461 |
| Cow position: | chr6:28701165-28700866 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 161-461 |
| Cow position: | chr6:51877154-51877453 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 131 |
| Conread position: | 161-463 |
| Cow position: | chr6:3152616-3152913 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr6:12997820-12998117 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 161-463 |
| Cow position: | chr6:16049892-16049595 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 42 |
| Conread position: | 161-463 |
| Cow position: | chr6:19706828-19707130 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 161-463 |
| Cow position: | chr6:21712107-21712407 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr6:22737305-22737005 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr6:23568192-23567907 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr6:25374707-25374407 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr6:27173242-27173542 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr6:28000995-28000695 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr6:28065391-28065689 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr6:37387967-37388267 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-463 |
| Cow position: | chr6:62665176-62665476 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 161-464 |
| Cow position: | chr6:6200731-6201031 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 161-464 |
| Cow position: | chr6:13740956-13741250 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 161-464 |
| Cow position: | chr6:16737275-16737573 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 50 |
| Conread position: | 161-464 |
| Cow position: | chr6:19059677-19059975 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 46 |
| Conread position: | 161-464 |
| Cow position: | chr6:36531675-36531977 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 161-464 |
| Cow position: | chr6:46764005-46763704 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 161-464 |
| Cow position: | chr6:55169874-55170172 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 42 |
| Conread position: | 161-464 |
| Cow position: | chr6:57308625-57308923 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 162-464 |
| Cow position: | chr6:61632337-61632044 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 163-463 |
| Cow position: | chr6:36901413-36901711 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 163-464 |
| Cow position: | chr6:42267124-42267418 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 181-464 |
| Cow position: | chr6:49444535-49444820 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 110 |
| Conread position: | 184-460 |
| Cow position: | chr6:7112292-7112017 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 108 |
Show alignments to all cow chromosomes.