Cow genome map


           Conread name:
           Pla1-C0000030_A15
        

               Conread position:
               43-149
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-156
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               43-157
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-464
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               141-463
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               141-464
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               142-359
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 151
               

               Conread position:
               143-270
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               143-461
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               143-463
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               144-463
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               147-443
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               153-458
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               153-463
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               161-269
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-319
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               161-320
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               161-320
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 42
               

               Conread position:
               161-320
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 123
               

               Conread position:
               161-322
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-322
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               136
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               161-408
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-443
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-461
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-462
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 42
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 42
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-464
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 42
               

               Conread position:
               161-464
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               161-464
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 64
               

               Conread position:
               161-464
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               161-464
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               161-464
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 142
               

               Conread position:
               161-464
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               163-464
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 48
               

               Conread position:
               190-464
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               194-464
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               
Show alignments to all cow chromosomes.