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Cow genome map

           
Conread name:
           
Pla1-C0000037_O09
        

               
Conread position:
               
72-407
               

               
Cow position:
               
chr16:7456197-7456516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
81-226
               

               
Cow position:
               
chr16:20025747-20025606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
83-381
               

               
Cow position:
               
chr16:24403190-24403459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
84-369
               

               
Cow position:
               
chr16:5727173-5726914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
86-181
               

               
Cow position:
               
chr16:4911234-4911329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
86-181
               

               
Cow position:
               
chr16:30613006-30613101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
86-184
               

               
Cow position:
               
chr16:7665856-7665757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
86-372
               

               
Cow position:
               
chr16:6310449-6310724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr16:51620228-51620476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
87-407
               

               
Cow position:
               
chr16:17627166-17626872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
198, 42
               

               
Conread position:
               
88-407
               

               
Cow position:
               
chr16:39646826-39646486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
14, 208
               

               
Conread position:
               
89-177
               

               
Cow position:
               
chr16:8809884-8809972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
89-190
               

               
Cow position:
               
chr16:8953461-8953561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
89-228
               

               
Cow position:
               
chr16:12091440-12091574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
89-272
               

               
Cow position:
               
chr16:12414281-12414464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 143
               

               
Conread position:
               
90-340
               

               
Cow position:
               
chr16:52705832-52706067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
90-407
               

               
Cow position:
               
chr16:30142960-30143263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
93-372
               

               
Cow position:
               
chr16:11391161-11390880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
93-407
               

               
Cow position:
               
chr16:11102580-11102881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
274, 78
               

               
Conread position:
               
94-212
               

               
Cow position:
               
chr16:44568798-44568915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
94-241
               

               
Cow position:
               
chr16:18429796-18429649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
125, 91
               

               
Conread position:
               
94-343
               

               
Cow position:
               
chr16:41038226-41037987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 85
               

               
Conread position:
               
94-370
               

               
Cow position:
               
chr16:55592802-55592543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
94-372
               

               
Cow position:
               
chr16:39202396-39202117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
94-386
               

               
Cow position:
               
chr16:17291775-17292061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
94-407
               

               
Cow position:
               
chr16:7550219-7549908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 104
               

               
Conread position:
               
94-407
               

               
Cow position:
               
chr16:43675151-43674816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 262
               

               
Conread position:
               
95-190
               

               
Cow position:
               
chr16:56248726-56248821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
91, 83
               

               
Conread position:
               
95-366
               

               
Cow position:
               
chr16:50286765-50286496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
95-408
               

               
Cow position:
               
chr16:6319437-6319141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
96-304
               

               
Cow position:
               
chr16:48099706-48099505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
96-407
               

               
Cow position:
               
chr16:54084291-54083977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
135, 82
               

               
Conread position:
               
97-353
               

               
Cow position:
               
chr16:16945051-16945302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
152, 81
               

               
Conread position:
               
99-331
               

               
Cow position:
               
chr16:11922802-11923010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
160, 66
               

               
Conread position:
               
101-203
               

               
Cow position:
               
chr16:20749412-20749309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
101-212
               

               
Cow position:
               
chr16:11083197-11083083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
101-280
               

               
Cow position:
               
chr16:39238501-39238323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
104, 77
               

               
Conread position:
               
101-348
               

               
Cow position:
               
chr16:53614326-53614097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
101-388
               

               
Cow position:
               
chr16:13726071-13725789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
101-407
               

               
Cow position:
               
chr16:7499301-7499002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
102-206
               

               
Cow position:
               
chr16:30358707-30358811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
102-389
               

               
Cow position:
               
chr16:56843908-56844187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
102-407
               

               
Cow position:
               
chr16:28834072-28833778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
270, 57
               

               
Conread position:
               
106-331
               

               
Cow position:
               
chr16:33752958-33752751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
111-344
               

               
Cow position:
               
chr16:52803725-52803952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
215, 52
               

               
Conread position:
               
116-391
               

               
Cow position:
               
chr16:6213824-6213559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
116-403
               

               
Cow position:
               
chr16:30135689-30135948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
265, 32
               

               
Conread position:
               
118-407
               

               
Cow position:
               
chr16:496149-496434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr16:9279897-9280129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr16:13414434-13414704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
140-413
               

               
Cow position:
               
chr16:12010310-12010033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
149-405
               

               
Cow position:
               
chr16:23955634-23955887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
149-406
               

               
Cow position:
               
chr16:17135922-17135670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
149-407
               

               
Cow position:
               
chr16:33530605-33530354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
149-407
               

               
Cow position:
               
chr16:35297282-35297009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
151-366
               

               
Cow position:
               
chr16:22824641-22824851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
154-404
               

               
Cow position:
               
chr16:33135135-33134886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
161-356
               

               
Cow position:
               
chr16:12454601-12454796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
161-407
               

               
Cow position:
               
chr16:26030704-26030943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
162-383
               

               
Cow position:
               
chr16:8205898-8206107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr16:9161269-9161022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
210, 15
               

               
Conread position:
               
168-370
               

               
Cow position:
               
chr16:6270136-6269928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
168-406
               

               
Cow position:
               
chr16:12634069-12633830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
168-407
               

               
Cow position:
               
chr16:12500975-12501219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
168-407
               

               
Cow position:
               
chr16:22804416-22804657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
171-339
               

               
Cow position:
               
chr16:34433344-34433516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
171-373
               

               
Cow position:
               
chr16:55968617-55968418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
171-380
               

               
Cow position:
               
chr16:34291112-34291322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
172-332
               

               
Cow position:
               
chr16:27032752-27032593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
174-353
               

               
Cow position:
               
chr16:6378949-6379128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
177-383
               

               
Cow position:
               
chr16:56875489-56875696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
178-407
               

               
Cow position:
               
chr16:41689862-41689638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
184-406
               

               
Cow position:
               
chr16:9500690-9500459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
22, 218
               

               
Conread position:
               
185-404
               

               
Cow position:
               
chr16:31162966-31163182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
187-368
               

               
Cow position:
               
chr16:48448882-48448704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
188-380
               

               
Cow position:
               
chr16:4736428-4736615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
188-407
               

               
Cow position:
               
chr16:18141167-18141387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
190-407
               

               
Cow position:
               
chr16:25839781-25839560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
191-370
               

               
Cow position:
               
chr16:12097798-12097620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
191-400
               

               
Cow position:
               
chr16:43105355-43105566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
192-370
               

               
Cow position:
               
chr16:1415142-1415319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 124
               

               
Conread position:
               
194-368
               

               
Cow position:
               
chr16:14046375-14046542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
194-403
               

               
Cow position:
               
chr16:9973343-9973553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
194-407
               

               
Cow position:
               
chr16:3634270-3634052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
196-407
               

               
Cow position:
               
chr16:13611303-13611512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
196-407
               

               
Cow position:
               
chr16:18353805-18354015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
196-407
               

               
Cow position:
               
chr16:44683507-44683720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
197-343
               

               
Cow position:
               
chr16:20265412-20265557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
197-373
               

               
Cow position:
               
chr16:50282279-50282457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
197-407
               

               
Cow position:
               
chr16:38905090-38905287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
197-407
               

               
Cow position:
               
chr16:52133367-52133571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
197-441
               

               
Cow position:
               
chr16:4971887-4972112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
198-445
               

               
Cow position:
               
chr16:22841910-22842154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
184, 8
               

               
Conread position:
               
200-380
               

               
Cow position:
               
chr16:10945294-10945468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
201-375
               

               
Cow position:
               
chr16:45044963-45044792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 132
               

               
Conread position:
               
201-407
               

               
Cow position:
               
chr16:43276164-43275963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
202-407
               

               
Cow position:
               
chr16:15960143-15960350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr16:18048011-18048178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
205-337
               

               
Cow position:
               
chr16:11019376-11019504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
205-381
               

               
Cow position:
               
chr16:30174388-30174558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
205-407
               

               
Cow position:
               
chr16:8273694-8273896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
167, 175
               

               
Conread position:
               
205-407
               

               
Cow position:
               
chr16:31348622-31348826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
118, 93
               

               
Conread position:
               
205-407
               

               
Cow position:
               
chr16:33869628-33869819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
205-407
               

               
Cow position:
               
chr16:50453911-50453704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
206-316
               

               
Cow position:
               
chr16:23187687-23187577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr16:15905109-15905278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr16:46548128-46548300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
206-407
               

               
Cow position:
               
chr16:7619040-7619236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
206-407
               

               
Cow position:
               
chr16:54734383-54734187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
207-407
               

               
Cow position:
               
chr16:47303983-47304183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
208-405
               

               
Cow position:
               
chr16:17143072-17142882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
210-406
               

               
Cow position:
               
chr16:8193593-8193393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr16:42444294-42444064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
207, 33
               

               
Conread position:
               
211-379
               

               
Cow position:
               
chr16:41530162-41530329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
211-390
               

               
Cow position:
               
chr16:45122174-45121991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
212-407
               

               
Cow position:
               
chr16:56796529-56796724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-387
               

               
Cow position:
               
chr16:53508850-53509023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
214-398
               

               
Cow position:
               
chr16:28395948-28396133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
164, 19
               

               
Conread position:
               
214-404
               

               
Cow position:
               
chr16:47964685-47964871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
214-406
               

               
Cow position:
               
chr16:22773115-22772920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
20, 169
               

               
Conread position:
               
214-407
               

               
Cow position:
               
chr16:42733876-42734074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
214-407
               

               
Cow position:
               
chr16:50931391-50931575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
215-347
               

               
Cow position:
               
chr16:11653271-11653140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
215-358
               

               
Cow position:
               
chr16:9836640-9836782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 107
               

               
Conread position:
               
215-368
               

               
Cow position:
               
chr16:13252178-13252325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
215-403
               

               
Cow position:
               
chr16:45554575-45554388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
215-407
               

               
Cow position:
               
chr16:18206096-18205902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 140
               

               
Conread position:
               
215-407
               

               
Cow position:
               
chr16:48385272-48385459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
216-376
               

               
Cow position:
               
chr16:11359282-11359124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
216-388
               

               
Cow position:
               
chr16:49860367-49860195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
111, 7
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr16:36203485-36203680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
216-407
               

               
Cow position:
               
chr16:11083131-11082944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
216-407
               

               
Cow position:
               
chr16:22380220-22380412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
216-407
               

               
Cow position:
               
chr16:51598479-51598664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 116
               

               
Conread position:
               
216-445
               

               
Cow position:
               
chr16:44210424-44210660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr16:7429511-7429321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
217-407
               

               
Cow position:
               
chr16:17982013-17982200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
153, 22
               

               
Conread position:
               
218-399
               

               
Cow position:
               
chr16:7505216-7505037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
218-407
               

               
Cow position:
               
chr16:42241988-42242174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
219-348
               

               
Cow position:
               
chr16:43758515-43758645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
219-407
               

               
Cow position:
               
chr16:11008463-11008285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
155, 16
               

               
Conread position:
               
219-407
               

               
Cow position:
               
chr16:35623122-35623301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
220-406
               

               
Cow position:
               
chr16:30036861-30037049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
220-407
               

               
Cow position:
               
chr16:2223268-2223460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
220-407
               

               
Cow position:
               
chr16:29766455-29766279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
221-385
               

               
Cow position:
               
chr16:55945011-55945175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
221-407
               

               
Cow position:
               
chr16:21317465-21317656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
222-352
               

               
Cow position:
               
chr16:19053756-19053886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
222-371
               

               
Cow position:
               
chr16:29026332-29026186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
222-372
               

               
Cow position:
               
chr16:11390158-11390309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
222-379
               

               
Cow position:
               
chr16:17283574-17283417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 150
               

               
Conread position:
               
222-391
               

               
Cow position:
               
chr16:49229644-49229810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
222-398
               

               
Cow position:
               
chr16:15953692-15953872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
222-402
               

               
Cow position:
               
chr16:19644015-19643832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 31
               

               
Conread position:
               
222-404
               

               
Cow position:
               
chr16:9830571-9830391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
222-404
               

               
Cow position:
               
chr16:11584278-11584453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
222-404
               

               
Cow position:
               
chr16:31117488-31117670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
166, 121
               

               
Conread position:
               
222-406
               

               
Cow position:
               
chr16:7702646-7702472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
152, 78
               

               
Conread position:
               
222-406
               

               
Cow position:
               
chr16:23681489-23681308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
151, 84
               

               
Conread position:
               
222-406
               

               
Cow position:
               
chr16:46552920-46552745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:5364028-5363837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:13306745-13306926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:14754196-14754381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:16402206-16402379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:16548736-16548551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:17282785-17282604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
148, 90
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:18757712-18757898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
150, 120
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:19670226-19670408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:20872148-20871966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:36286558-36286741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
152, 13
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:48545948-48545762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:51112753-51112935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr16:54664672-54664859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
222-419
               

               
Cow position:
               
chr16:45785864-45785665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
151, 195
               

               
Conread position:
               
222-420
               

               
Cow position:
               
chr16:12077360-12077549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
223-331
               

               
Cow position:
               
chr16:9097149-9097041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-338
               

               
Cow position:
               
chr16:7611989-7611874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-346
               

               
Cow position:
               
chr16:28199154-28199032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
223-370
               

               
Cow position:
               
chr16:35297527-35297385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
122, 47
               

               
Conread position:
               
223-372
               

               
Cow position:
               
chr16:258160-258302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
223-372
               

               
Cow position:
               
chr16:22329287-22329138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-377
               

               
Cow position:
               
chr16:15254631-15254781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
223-383
               

               
Cow position:
               
chr16:22738400-22738245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
223-385
               

               
Cow position:
               
chr16:20205587-20205425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-388
               

               
Cow position:
               
chr16:44138367-44138531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
155, 88
               

               
Conread position:
               
223-396
               

               
Cow position:
               
chr16:25154617-25154795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:820380-820190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:3614867-3614687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:7665763-7665578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:8522264-8522451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:15370812-15370624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:22984879-22984699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:29038040-29037853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:35188375-35188196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:37452488-37452674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:38663585-38663768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
158, 80
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:40700611-40700787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
151, 36
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:42633618-42633809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
145, 119
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:48145277-48145461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr16:56082239-56082421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
224-352
               

               
Cow position:
               
chr16:51382498-51382623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
224-376
               

               
Cow position:
               
chr16:12939745-12939592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
224-381
               

               
Cow position:
               
chr16:9578367-9578524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
224-403
               

               
Cow position:
               
chr16:33405369-33405550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
224-407
               

               
Cow position:
               
chr16:30186767-30186585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
224-407
               

               
Cow position:
               
chr16:30358938-30359119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
224-408
               

               
Cow position:
               
chr16:28444365-28444548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
150, 168
               

               
Conread position:
               
225-371
               

               
Cow position:
               
chr16:56265624-56265480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
225-404
               

               
Cow position:
               
chr16:26649505-26649685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
149, 167
               

               
Conread position:
               
225-407
               

               
Cow position:
               
chr16:48006369-48006551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
226-331
               

               
Cow position:
               
chr16:16280250-16280355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
226-371
               

               
Cow position:
               
chr16:7496377-7496235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
226-381
               

               
Cow position:
               
chr16:29655448-29655294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
226-389
               

               
Cow position:
               
chr16:8673490-8673652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
226-406
               

               
Cow position:
               
chr16:39165361-39165184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
226-407
               

               
Cow position:
               
chr16:8076379-8076566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
226-407
               

               
Cow position:
               
chr16:14685267-14685448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
228-337
               

               
Cow position:
               
chr16:50569384-50569276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
230-383
               

               
Cow position:
               
chr16:53086222-53086373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
132, 107
               

               
Conread position:
               
230-384
               

               
Cow position:
               
chr16:12324574-12324420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-400
               

               
Cow position:
               
chr16:4698871-4699036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
230-407
               

               
Cow position:
               
chr16:21905265-21905105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 41
               

               
Conread position:
               
230-407
               

               
Cow position:
               
chr16:50688640-50688463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-335
               

               
Cow position:
               
chr16:33290502-33290398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-338
               

               
Cow position:
               
chr16:4102713-4102820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-343
               

               
Cow position:
               
chr16:15203251-15203363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-353
               

               
Cow position:
               
chr16:30908828-30908951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
231-353
               

               
Cow position:
               
chr16:34412926-34412805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
231-364
               

               
Cow position:
               
chr16:5382301-5382163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
231-364
               

               
Cow position:
               
chr16:12220799-12220666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-367
               

               
Cow position:
               
chr16:8065529-8065668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
231-368
               

               
Cow position:
               
chr16:9596488-9596351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-368
               

               
Cow position:
               
chr16:13996078-13996214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
231-377
               

               
Cow position:
               
chr16:40745241-40745387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-379
               

               
Cow position:
               
chr16:15023513-15023661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-380
               

               
Cow position:
               
chr16:44713362-44713511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
231-380
               

               
Cow position:
               
chr16:51697203-51697052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
231-382
               

               
Cow position:
               
chr16:7812808-7812657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
231-383
               

               
Cow position:
               
chr16:9560377-9560528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
231-386
               

               
Cow position:
               
chr16:45046956-45046801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
78, 93
               

               
Conread position:
               
231-387
               

               
Cow position:
               
chr16:15407441-15407595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
231-387
               

               
Cow position:
               
chr16:30027991-30027836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
122, 136
               

               
Conread position:
               
231-391
               

               
Cow position:
               
chr16:20648030-20647878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
231-400
               

               
Cow position:
               
chr16:48086752-48086921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
149, 37
               

               
Conread position:
               
231-402
               

               
Cow position:
               
chr16:10366042-10365865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
231-405
               

               
Cow position:
               
chr16:9497149-9497323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
231-405
               

               
Cow position:
               
chr16:26676568-26676743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
231-406
               

               
Cow position:
               
chr16:53830474-53830643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
149, 81
               

               
Conread position:
               
231-406
               

               
Cow position:
               
chr16:56565714-56565540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
83, 146
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:4910407-4910585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:8018086-8017909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
89, 163
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:8025737-8025908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:8933310-8933482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:10773239-10773074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:13578743-13578920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:22919585-22919408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
143, 122
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:29557507-29557686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:38243545-38243720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:40514364-40514539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
149, 138
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:42340314-42340137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:44429001-44428821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:48340576-48340755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
145, 165
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:49169263-49169443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:50289268-50289091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
143, 30
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr16:54226482-54226657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
143, 81
               

               
Conread position:
               
231-445
               

               
Cow position:
               
chr16:51869757-51869545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
178, 161
               

               
Conread position:
               
232-383
               

               
Cow position:
               
chr16:52854905-52855065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 148
               

               
Conread position:
               
232-386
               

               
Cow position:
               
chr16:56665692-56665536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
232-389
               

               
Cow position:
               
chr16:30715621-30715460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
232-390
               

               
Cow position:
               
chr16:13712816-13712973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
232-398
               

               
Cow position:
               
chr16:34753843-34754010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 162
               

               
Conread position:
               
232-403
               

               
Cow position:
               
chr16:29677517-29677686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
232-407
               

               
Cow position:
               
chr16:4192317-4192483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
232-407
               

               
Cow position:
               
chr16:4399852-4399678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
232-407
               

               
Cow position:
               
chr16:14242485-14242312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
142, 64
               

               
Conread position:
               
232-407
               

               
Cow position:
               
chr16:20633759-20633937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 113
               

               
Conread position:
               
232-407
               

               
Cow position:
               
chr16:34220303-34220125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
142, 164
               

               
Conread position:
               
232-407
               

               
Cow position:
               
chr16:46452626-46452804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
232-407
               

               
Cow position:
               
chr16:56670802-56670979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
120, 150
               

               
Conread position:
               
233-380
               

               
Cow position:
               
chr16:45943650-45943805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
233-384
               

               
Cow position:
               
chr16:11957462-11957612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
233-386
               

               
Cow position:
               
chr16:22323695-22323854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 145
               

               
Conread position:
               
233-400
               

               
Cow position:
               
chr16:8441692-8441857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 105
               

               
Conread position:
               
233-407
               

               
Cow position:
               
chr16:591691-591869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 174
               

               
Conread position:
               
233-407
               

               
Cow position:
               
chr16:25380379-25380552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
99, 139
               

               
Conread position:
               
233-407
               

               
Cow position:
               
chr16:32301890-32302063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 139
               

               
Conread position:
               
234-390
               

               
Cow position:
               
chr16:11916094-11916255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
234-407
               

               
Cow position:
               
chr16:7583512-7583339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
140, 159
               

               
Conread position:
               
235-371
               

               
Cow position:
               
chr16:50677983-50677840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
235-387
               

               
Cow position:
               
chr16:40446378-40446226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
235-389
               

               
Cow position:
               
chr16:27723338-27723183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
145, 118
               

               
Conread position:
               
235-393
               

               
Cow position:
               
chr16:8438538-8438693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
93, 140
               

               
Conread position:
               
235-407
               

               
Cow position:
               
chr16:1220065-1220241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
134, 82
               

               
Conread position:
               
235-407
               

               
Cow position:
               
chr16:8322869-8323041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
235-407
               

               
Cow position:
               
chr16:8768907-8768744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
235-407
               

               
Cow position:
               
chr16:14974430-14974593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
235-407
               

               
Cow position:
               
chr16:15809092-15808916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 112
               

               
Conread position:
               
235-407
               

               
Cow position:
               
chr16:26372837-26373007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
235-407
               

               
Cow position:
               
chr16:42432997-42433174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
235-407
               

               
Cow position:
               
chr16:43505697-43505861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
235-407
               

               
Cow position:
               
chr16:48493294-48493120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
235-411
               

               
Cow position:
               
chr16:12687998-12688171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr16:23738294-23738122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
236-407
               

               
Cow position:
               
chr16:8448542-8448706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
236-407
               

               
Cow position:
               
chr16:23366353-23366186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
236-411
               

               
Cow position:
               
chr16:51043765-51043589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
137, 75
               

               
Conread position:
               
236-441
               

               
Cow position:
               
chr16:23472861-23472656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
237-407
               

               
Cow position:
               
chr16:22327622-22327441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 147
               

               
Conread position:
               
238-406
               

               
Cow position:
               
chr16:27160753-27160923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
238-407
               

               
Cow position:
               
chr16:10148393-10148222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
242-384
               

               
Cow position:
               
chr16:29096028-29095892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
242-385
               

               
Cow position:
               
chr16:11477972-11478110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
134, 14
               

               
Conread position:
               
242-388
               

               
Cow position:
               
chr16:50409352-50409207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
242-406
               

               
Cow position:
               
chr16:44580965-44581132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
242-407
               

               
Cow position:
               
chr16:16565227-16565063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
243-397
               

               
Cow position:
               
chr16:15726254-15726407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
243-404
               

               
Cow position:
               
chr16:50667397-50667230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
243-406
               

               
Cow position:
               
chr16:42176751-42176587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
128, 13
               

               
Conread position:
               
243-407
               

               
Cow position:
               
chr16:16597663-16597502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
243-407
               

               
Cow position:
               
chr16:36120877-36121038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
243-407
               

               
Cow position:
               
chr16:38091117-38091283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
243-407
               

               
Cow position:
               
chr16:53627322-53627486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-371
               

               
Cow position:
               
chr16:8030882-8030757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-406
               

               
Cow position:
               
chr16:14758837-14758676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
247-406
               

               
Cow position:
               
chr16:52889310-52889468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
134, 9
               

               
Conread position:
               
250-406
               

               
Cow position:
               
chr16:13648426-13648279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
252-407
               

               
Cow position:
               
chr16:11774951-11775107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 123
               

               
Conread position:
               
252-407
               

               
Cow position:
               
chr16:31426439-31426285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
253-383
               

               
Cow position:
               
chr16:30940039-30939911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
254-381
               

               
Cow position:
               
chr16:27261856-27261979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
255-407
               

               
Cow position:
               
chr16:50521570-50521419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
256-379
               

               
Cow position:
               
chr16:32327751-32327629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
258-407
               

               
Cow position:
               
chr16:35758293-35758146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
122, 112
               

               
Conread position:
               
261-386
               

               
Cow position:
               
chr16:53408842-53408966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
264-373
               

               
Cow position:
               
chr16:12503136-12503030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
264-407
               

               
Cow position:
               
chr16:9933241-9933100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
277-405
               

               
Cow position:
               
chr16:24672286-24672413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 35
               
Show alignments to all cow chromosomes.