Cow genome map

Conread name: Pla1-C0000037_O09

Conread position: 79-326
Cow position: chr20:15547484-15547255 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 91

Conread position: 83-352
Cow position: chr20:15847041-15846794 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 85-215
Cow position: chr20:19090548-19090683 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 99

Conread position: 86-406
Cow position: chr20:23870538-23870835 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 284, 71

Conread position: 88-407
Cow position: chr20:9537424-9537121 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 91

Conread position: 93-406
Cow position: chr20:21715040-21714741 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 85

Conread position: 93-407
Cow position: chr20:34777477-34777164 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 13

Conread position: 94-222
Cow position: chr20:24310691-24310815 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 94-297
Cow position: chr20:18100877-18100677 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 7, 63

Conread position: 94-406
Cow position: chr20:33438706-33438994 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 95-176
Cow position: chr20:29755027-29754946 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 73
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 96-407
Cow position: chr20:34901880-34901553 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 64

Conread position: 97-211
Cow position: chr20:9700448-9700564 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 83

Conread position: 97-348
Cow position: chr20:36023111-36023357 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 8, 0

Conread position: 99-226
Cow position: chr20:10788669-10788792 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 99-407
Cow position: chr20:9923836-9923567 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 100-271
Cow position: chr20:32447713-32447532 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 33

Conread position: 101-305
Cow position: chr20:32627289-32627094 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 101-310
Cow position: chr20:24522587-24522378 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 89, 77

Conread position: 101-407
Cow position: chr20:6890986-6890699 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 105-355
Cow position: chr20:30027613-30027384 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 69

Conread position: 106-380
Cow position: chr20:13944038-13943776 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 73, 0

Conread position: 106-407
Cow position: chr20:20056217-20056500 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 61

Conread position: 116-447
Cow position: chr20:17846228-17845899 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 64

Conread position: 119-407
Cow position: chr20:16548016-16548293 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 57

Conread position: 121-386
Cow position: chr20:26723412-26723672 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 67

Conread position: 131-406
Cow position: chr20:13983623-13983340 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 46, 134

Conread position: 139-381
Cow position: chr20:32988573-32988820 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 143

Conread position: 139-407
Cow position: chr20:40158134-40157885 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 152-406
Cow position: chr20:15822786-15822538 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 40

Conread position: 155-379
Cow position: chr20:12085197-12085421 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 18

Conread position: 161-350
Cow position: chr20:26058996-26059190 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 162-379
Cow position: chr20:35207978-35208193 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 30

Conread position: 166-345
Cow position: chr20:3359104-3359286 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 167-404
Cow position: chr20:6603265-6603027 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 22, 69

Conread position: 168-327
Cow position: chr20:35211038-35211196 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 9

Conread position: 169-347
Cow position: chr20:24392396-24392226 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 169-383
Cow position: chr20:11038807-11038590 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 99

Conread position: 170-407
Cow position: chr20:5636699-5636468 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 8

Conread position: 172-407
Cow position: chr20:33532521-33532290 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 191, 53

Conread position: 178-366
Cow position: chr20:11444287-11444104 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 178-406
Cow position: chr20:12995795-12996025 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 54

Conread position: 180-407
Cow position: chr20:39728662-39728433 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 122, 101

Conread position: 184-380
Cow position: chr20:206447-206639 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 188, 12

Conread position: 186-352
Cow position: chr20:36671233-36671393 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 21

Conread position: 190-407
Cow position: chr20:1576294-1576077 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 9

Conread position: 190-407
Cow position: chr20:23506273-23506485 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 194-406
Cow position: chr20:28067229-28067442 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 180, 12

Conread position: 194-407
Cow position: chr20:38578570-38578778 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 179, 12

Conread position: 195-325
Cow position: chr20:37228888-37229018 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 46

Conread position: 195-441
Cow position: chr20:38551562-38551325 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 60

Conread position: 196-397
Cow position: chr20:7363157-7362959 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 178, 117

Conread position: 196-407
Cow position: chr20:32866001-32866205 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 14

Conread position: 197-406
Cow position: chr20:23064638-23064845 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 9, 116

Conread position: 199-407
Cow position: chr20:20739094-20739302 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 135

Conread position: 202-373
Cow position: chr20:34202822-34202652 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 150, 18

Conread position: 205-336
Cow position: chr20:2823056-2822925 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 205-394
Cow position: chr20:33820642-33820454 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 56

Conread position: 205-407
Cow position: chr20:11481949-11482150 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 206-407
Cow position: chr20:15568765-15568961 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 206-407
Cow position: chr20:21929091-21928890 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 18, 166

Conread position: 207-383
Cow position: chr20:35365224-35365052 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 23

Conread position: 208-407
Cow position: chr20:15565645-15565841 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 84

Conread position: 208-407
Cow position: chr20:38090092-38089896 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 157, 22

Conread position: 209-346
Cow position: chr20:2148011-2148147 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 209-407
Cow position: chr20:5078809-5078608 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 171, 0

Conread position: 210-405
Cow position: chr20:29845231-29845036 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 164, 46

Conread position: 210-406
Cow position: chr20:20099418-20099610 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 32

Conread position: 211-402
Cow position: chr20:33363697-33363504 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 177, 42

Conread position: 216-343
Cow position: chr20:26930383-26930257 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 216-349
Cow position: chr20:7622807-7622939 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 71

Conread position: 216-394
Cow position: chr20:7426021-7426200 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 216-407
Cow position: chr20:5385569-5385755 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 19

Conread position: 217-407
Cow position: chr20:7441965-7442143 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 0

Conread position: 218-400
Cow position: chr20:11101584-11101403 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 48

Conread position: 218-426
Cow position: chr20:19237248-19237043 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 219-384
Cow position: chr20:40782133-40781970 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 152, 0

Conread position: 219-406
Cow position: chr20:29084213-29084404 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 29

Conread position: 219-407
Cow position: chr20:8429913-8429734 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 39

Conread position: 219-407
Cow position: chr20:17251889-17251700 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 160, 115

Conread position: 219-407
Cow position: chr20:22485035-22484847 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 111

Conread position: 221-381
Cow position: chr20:30744550-30744710 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 151

Conread position: 221-396
Cow position: chr20:361020-361190 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 221-407
Cow position: chr20:9433759-9433570 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 6, 0

Conread position: 221-407
Cow position: chr20:11188637-11188814 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 222-389
Cow position: chr20:23846495-23846666 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 222-397
Cow position: chr20:14879956-14879781 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 151, 9

Conread position: 222-400
Cow position: chr20:30710468-30710647 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 25

Conread position: 222-406
Cow position: chr20:13652198-13652381 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 149, 0

Conread position: 222-407
Cow position: chr20:4755664-4755847 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 35

Conread position: 222-407
Cow position: chr20:14980337-14980528 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 78, 31

Conread position: 222-407
Cow position: chr20:16941119-16941306 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 151, 107

Conread position: 222-407
Cow position: chr20:19751476-19751292 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 222-407
Cow position: chr20:20984161-20983981 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 149, 0

Conread position: 222-407
Cow position: chr20:21345602-21345412 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 104, 0

Conread position: 222-407
Cow position: chr20:21428328-21428144 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 120, 39

Conread position: 222-407
Cow position: chr20:34221646-34221466 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 222-407
Cow position: chr20:36633983-36633803 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 87

Conread position: 222-448
Cow position: chr20:13023332-13023554 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 37

Conread position: 223-327
Cow position: chr20:15515272-15515376 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 223-343
Cow position: chr20:8021294-8021174 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 223-346
Cow position: chr20:24002769-24002646 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 35

Conread position: 223-350
Cow position: chr20:31845117-31845244 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 35

Conread position: 223-369
Cow position: chr20:7416999-7417145 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 223-370
Cow position: chr20:17388700-17388552 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 78

Conread position: 223-374
Cow position: chr20:40303719-40303866 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 223-376
Cow position: chr20:14917453-14917300 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 223-379
Cow position: chr20:23590581-23590735 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 110, 0

Conread position: 223-389
Cow position: chr20:32847513-32847348 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 155, 0

Conread position: 223-393
Cow position: chr20:35727762-35727937 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 147, 0

Conread position: 223-402
Cow position: chr20:11008338-11008158 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 37

Conread position: 223-405
Cow position: chr20:29990280-29990456 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 35

Conread position: 223-406
Cow position: chr20:12534572-12534756 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 27, 93

Conread position: 223-407
Cow position: chr20:14564219-14564038 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 67

Conread position: 223-407
Cow position: chr20:20898422-20898606 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 151, 178

Conread position: 223-407
Cow position: chr20:20967489-20967303 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 152
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 150, 0

Conread position: 223-407
Cow position: chr20:23850788-23850605 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 35

Conread position: 223-407
Cow position: chr20:24712009-24711820 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 224-376
Cow position: chr20:20934566-20934717 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 224-407
Cow position: chr20:3599231-3599410 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 90

Conread position: 224-407
Cow position: chr20:10772372-10772188 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 153
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 7

Conread position: 224-407
Cow position: chr20:11135586-11135778 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 224-407
Cow position: chr20:21372475-21372291 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 168, 0

Conread position: 224-407
Cow position: chr20:29805492-29805677 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 154, 56

Conread position: 224-407
Cow position: chr20:33434993-33435182 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 41

Conread position: 224-407
Cow position: chr20:35192932-35192762 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 225-407
Cow position: chr20:39398647-39398470 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 153, 0

Conread position: 226-406
Cow position: chr20:6096330-6096508 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 149, 0

Conread position: 226-407
Cow position: chr20:5644952-5644771 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 147, 63

Conread position: 226-407
Cow position: chr20:42197478-42197304 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 230-329
Cow position: chr20:18396086-18395987 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 231-329
Cow position: chr20:13617386-13617288 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 231-342
Cow position: chr20:8821578-8821687 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 231-349
Cow position: chr20:2316265-2316383 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-353
Cow position: chr20:21721370-21721248 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 231-366
Cow position: chr20:36312348-36312483 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 231-371
Cow position: chr20:5703632-5703491 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 231-373
Cow position: chr20:5365086-5364948 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 231-382
Cow position: chr20:40127183-40127335 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 27

Conread position: 231-386
Cow position: chr20:20158296-20158140 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 145, 0

Conread position: 231-390
Cow position: chr20:3141733-3141574 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 140, 25

Conread position: 231-397
Cow position: chr20:4334369-4334535 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 28, 141

Conread position: 231-399
Cow position: chr20:9412648-9412478 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 156, 0

Conread position: 231-400
Cow position: chr20:4945094-4945257 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 68, 0

Conread position: 231-400
Cow position: chr20:41473583-41473749 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 88

Conread position: 231-404
Cow position: chr20:10208968-10208793 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 38

Conread position: 231-405
Cow position: chr20:4332294-4332117 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 27

Conread position: 231-405
Cow position: chr20:5814726-5814555 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 27

Conread position: 231-406
Cow position: chr20:22959188-22959358 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 231-406
Cow position: chr20:33144393-33144567 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 231-407
Cow position: chr20:354741-354912 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 231-407
Cow position: chr20:18392111-18392276 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 231-407
Cow position: chr20:34097793-34097973 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 92, 0

Conread position: 231-407
Cow position: chr20:35906890-35907067 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 146

Conread position: 231-407
Cow position: chr20:39016712-39016892 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 17, 26

Conread position: 231-407
Cow position: chr20:42469919-42469743 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 77

Conread position: 231-408
Cow position: chr20:16291848-16291677 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 26

Conread position: 231-450
Cow position: chr20:36207974-36207747 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 113, 207

Conread position: 232-379
Cow position: chr20:23678556-23678706 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 126
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 232-387
Cow position: chr20:14283079-14282924 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 232-388
Cow position: chr20:15589202-15589045 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 96, 149

Conread position: 232-405
Cow position: chr20:6248442-6248617 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 26

Conread position: 232-406
Cow position: chr20:16492232-16492057 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 103, 143

Conread position: 232-407
Cow position: chr20:6054350-6054531 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 138, 0

Conread position: 232-407
Cow position: chr20:12126145-12126320 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 140, 161

Conread position: 232-407
Cow position: chr20:14100276-14100449 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 147, 89

Conread position: 232-407
Cow position: chr20:28594446-28594267 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 77

Conread position: 232-407
Cow position: chr20:39417744-39417911 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 26

Conread position: 233-400
Cow position: chr20:41627183-41627357 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 20

Conread position: 233-402
Cow position: chr20:6372405-6372571 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 146, 42

Conread position: 233-402
Cow position: chr20:35741926-35741755 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 148, 0

Conread position: 233-403
Cow position: chr20:6240363-6240533 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 148, 56

Conread position: 233-407
Cow position: chr20:580762-580939 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 139, 0

Conread position: 233-407
Cow position: chr20:10200504-10200327 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 138, 0

Conread position: 233-407
Cow position: chr20:40511598-40511774 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 141, 122

Conread position: 233-449
Cow position: chr20:24902135-24902356 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 141, 200

Conread position: 234-407
Cow position: chr20:23541003-23541172 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 23

Conread position: 235-338
Cow position: chr20:41274741-41274845 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 235-346
Cow position: chr20:6053312-6053423 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 235-376
Cow position: chr20:13752381-13752239 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 128

Conread position: 235-381
Cow position: chr20:4002250-4002107 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 235-389
Cow position: chr20:10818084-10818236 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 235-390
Cow position: chr20:2742981-2743136 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 147, 136

Conread position: 235-390
Cow position: chr20:5755569-5755408 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 23

Conread position: 235-400
Cow position: chr20:31323943-31323778 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 135, 76

Conread position: 235-407
Cow position: chr20:11359476-11359645 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 108

Conread position: 235-407
Cow position: chr20:31081194-31081025 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 137, 104

Conread position: 235-407
Cow position: chr20:34108261-34108096 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 236-407
Cow position: chr20:33067205-33067381 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 236-451
Cow position: chr20:37919211-37919425 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 139

Conread position: 237-407
Cow position: chr20:9266952-9267123 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 38

Conread position: 237-407
Cow position: chr20:9376623-9376453 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 129, 67

Conread position: 238-407
Cow position: chr20:13025457-13025631 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 243-406
Cow position: chr20:14572216-14572378 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 88, 28

Conread position: 243-407
Cow position: chr20:11548576-11548737 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 243-407
Cow position: chr20:14620153-14620325 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 243-407
Cow position: chr20:14759517-14759676 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 0

Conread position: 247-347
Cow position: chr20:15488850-15488750 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 247-407
Cow position: chr20:6424112-6423956 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 17, 74

Conread position: 253-407
Cow position: chr20:28955563-28955717 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 257-407
Cow position: chr20:35797743-35797593 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 55

Conread position: 258-407
Cow position: chr20:17765198-17765344 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 261-407
Cow position: chr20:24000666-24000813 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 110

Conread position: 262-407
Cow position: chr20:34001261-34001408 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 20

Conread position: 268-383
Cow position: chr20:16715515-16715397 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 275-406
Cow position: chr20:22313044-22313176 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 129

Conread position: 293-407
Cow position: chr20:35958746-35958630 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 304-407
Cow position: chr20:13967169-13967275 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Show alignments to all cow chromosomes.