Cow genome map

Conread name: Pla1-C0000037_O09

Conread position: 58-195
Cow position: chr28:32203371-32203235 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 9

Conread position: 82-380
Cow position: chr28:14934224-14933931 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 96

Conread position: 86-183
Cow position: chr28:6301304-6301206 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 87-348
Cow position: chr28:2743335-2743086 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 93

Conread position: 88-384
Cow position: chr28:10999411-10999701 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 69

Conread position: 89-400
Cow position: chr28:19079581-19079891 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 89

Conread position: 89-441
Cow position: chr28:7388525-7388854 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 134, 27

Conread position: 90-210
Cow position: chr28:4923620-4923499 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 89

Conread position: 94-183
Cow position: chr28:18791246-18791158 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 94-238
Cow position: chr28:20614339-20614485 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 94-406
Cow position: chr28:8408971-8408682 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 76

Conread position: 94-407
Cow position: chr28:4873112-4873402 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 278, 76

Conread position: 95-220
Cow position: chr28:28075561-28075687 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 84

Conread position: 95-385
Cow position: chr28:19025729-19026036 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 84, 294

Conread position: 95-399
Cow position: chr28:4536722-4536408 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 86

Conread position: 96-191
Cow position: chr28:26820066-26820159 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 97-356
Cow position: chr28:25487809-25488050 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 97-366
Cow position: chr28:3396926-3397210 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 77, 214

Conread position: 99-236
Cow position: chr28:19024657-19024521 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 78

Conread position: 101-265
Cow position: chr28:11271620-11271780 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 101-327
Cow position: chr28:8259065-8258850 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 106-407
Cow position: chr28:4841141-4841452 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 128

Conread position: 106-407
Cow position: chr28:25806797-25806519 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 72, 0

Conread position: 110-407
Cow position: chr28:16110164-16109883 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 143, 26

Conread position: 116-407
Cow position: chr28:8021879-8022163 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 258, 27

Conread position: 162-407
Cow position: chr28:2752309-2752548 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 210, 35

Conread position: 168-407
Cow position: chr28:8147677-8147915 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 10

Conread position: 169-407
Cow position: chr28:3914899-3914658 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 167, 21

Conread position: 171-386
Cow position: chr28:34247851-34248061 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 172-331
Cow position: chr28:11365352-11365505 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 173-406
Cow position: chr28:20313462-20313223 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 7

Conread position: 175-390
Cow position: chr28:7497970-7498187 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 13

Conread position: 177-406
Cow position: chr28:18354148-18354376 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 142

Conread position: 179-407
Cow position: chr28:2960656-2960887 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 27

Conread position: 185-407
Cow position: chr28:32174791-32174576 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 14

Conread position: 187-404
Cow position: chr28:15043696-15043914 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 9

Conread position: 188-353
Cow position: chr28:8102778-8102945 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 193-349
Cow position: chr28:12385137-12385289 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 193-407
Cow position: chr28:33052201-33051975 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 65

Conread position: 194-383
Cow position: chr28:2772866-2772683 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 194-405
Cow position: chr28:29434270-29434484 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 179, 13

Conread position: 195-351
Cow position: chr28:29041892-29042052 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 195-369
Cow position: chr28:5867881-5867711 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 139

Conread position: 196-394
Cow position: chr28:32179847-32179656 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 198-348
Cow position: chr28:20013593-20013440 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 199-405
Cow position: chr28:25677187-25677398 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 7

Conread position: 203-407
Cow position: chr28:25400019-25399819 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 17, 31

Conread position: 204-406
Cow position: chr28:7267798-7267996 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 205-315
Cow position: chr28:25518616-25518727 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 205-349
Cow position: chr28:5152751-5152605 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 205-379
Cow position: chr28:18770231-18770058 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 98

Conread position: 205-407
Cow position: chr28:19222004-19222204 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 169, 30

Conread position: 205-407
Cow position: chr28:27161179-27161381 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 84

Conread position: 207-377
Cow position: chr28:1632511-1632677 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 162, 125

Conread position: 207-407
Cow position: chr28:4823750-4823553 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 16, 47

Conread position: 208-407
Cow position: chr28:7437326-7437513 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 84

Conread position: 210-380
Cow position: chr28:31987876-31987707 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 148, 13

Conread position: 214-381
Cow position: chr28:10615806-10615974 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 215-405
Cow position: chr28:11348561-11348374 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 47

Conread position: 215-407
Cow position: chr28:17012170-17012345 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 216-383
Cow position: chr28:10958938-10958763 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 7

Conread position: 217-348
Cow position: chr28:16692060-16691928 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 217-361
Cow position: chr28:30081590-30081732 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 218-383
Cow position: chr28:19216956-19216791 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 159, 93

Conread position: 218-390
Cow position: chr28:17948978-17949153 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 156, 0

Conread position: 219-350
Cow position: chr28:9418832-9418963 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 219-407
Cow position: chr28:9100061-9099881 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 5, 52

Conread position: 219-407
Cow position: chr28:9285243-9285427 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 155, 80

Conread position: 220-440
Cow position: chr28:662240-662023 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 11

Conread position: 221-370
Cow position: chr28:3143746-3143892 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 130
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 89, 0

Conread position: 221-384
Cow position: chr28:23724330-23724491 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 20

Conread position: 221-387
Cow position: chr28:12991274-12991103 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 156

Conread position: 221-404
Cow position: chr28:7619016-7619203 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 221-407
Cow position: chr28:23410191-23410378 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 85, 157

Conread position: 221-427
Cow position: chr28:10297983-10297786 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 190, 91

Conread position: 222-343
Cow position: chr28:19024564-19024443 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 222-361
Cow position: chr28:8396466-8396327 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 222-363
Cow position: chr28:19038888-19039029 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 222-366
Cow position: chr28:10163926-10163787 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 9

Conread position: 222-379
Cow position: chr28:4355677-4355519 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 40

Conread position: 222-382
Cow position: chr28:6975372-6975211 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 151, 0

Conread position: 222-383
Cow position: chr28:8149501-8149663 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 135
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 152, 0

Conread position: 222-383
Cow position: chr28:24707030-24706867 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 222-389
Cow position: chr28:17739953-17739790 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 222-399
Cow position: chr28:5204326-5204147 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 152, 0

Conread position: 222-407
Cow position: chr28:4013215-4013033 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 161, 0

Conread position: 222-407
Cow position: chr28:4016662-4016479 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 149, 0

Conread position: 222-407
Cow position: chr28:5436958-5437141 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 152, 55

Conread position: 222-407
Cow position: chr28:7008845-7009030 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 155

Conread position: 222-407
Cow position: chr28:7350785-7350604 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 149, 0

Conread position: 222-407
Cow position: chr28:9812402-9812222 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 152, 48

Conread position: 222-407
Cow position: chr28:25249485-25249300 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 179, 149

Conread position: 222-407
Cow position: chr28:26743757-26743571 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 222-435
Cow position: chr28:17601423-17601633 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 183, 149

Conread position: 223-347
Cow position: chr28:117632-117757 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 34

Conread position: 223-348
Cow position: chr28:4022803-4022678 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 223-349
Cow position: chr28:8167224-8167346 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 223-353
Cow position: chr28:4163453-4163579 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 223-368
Cow position: chr28:5441769-5441913 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 130, 68

Conread position: 223-373
Cow position: chr28:2899119-2898969 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 223-376
Cow position: chr28:2819905-2819752 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 223-376
Cow position: chr28:3408089-3408241 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 223-380
Cow position: chr28:23047748-23047594 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 223-381
Cow position: chr28:11398667-11398825 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 223-385
Cow position: chr28:24646721-24646562 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 223-386
Cow position: chr28:19262457-19262619 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 151, 139

Conread position: 223-387
Cow position: chr28:5630226-5630065 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 55, 0

Conread position: 223-387
Cow position: chr28:21008537-21008697 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 136
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 223-390
Cow position: chr28:17680752-17680584 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 149, 0

Conread position: 223-393
Cow position: chr28:23793182-23793350 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 17

Conread position: 223-405
Cow position: chr28:3011140-3011324 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 61, 82

Conread position: 223-406
Cow position: chr28:3449442-3449249 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 157

Conread position: 223-406
Cow position: chr28:5236474-5236656 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 34

Conread position: 223-406
Cow position: chr28:5931479-5931301 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 159, 29

Conread position: 223-406
Cow position: chr28:11866535-11866719 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 158, 0

Conread position: 223-406
Cow position: chr28:11987301-11987119 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 67

Conread position: 223-406
Cow position: chr28:12055539-12055357 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 67

Conread position: 223-406
Cow position: chr28:28765773-28765957 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 154, 0

Conread position: 223-407
Cow position: chr28:751355-751177 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 223-407
Cow position: chr28:7697852-7698033 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 158, 89

Conread position: 223-407
Cow position: chr28:11559502-11559689 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 151, 0

Conread position: 223-407
Cow position: chr28:12672334-12672516 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 149

Conread position: 223-407
Cow position: chr28:26982608-26982790 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 148, 0

Conread position: 224-407
Cow position: chr28:5144392-5144573 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 147, 0

Conread position: 224-407
Cow position: chr28:16085453-16085270 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 18

Conread position: 224-445
Cow position: chr28:4881111-4881327 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 147

Conread position: 225-388
Cow position: chr28:12933602-12933770 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 225-399
Cow position: chr28:3492656-3492830 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 149, 105

Conread position: 225-407
Cow position: chr28:21598124-21598307 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 30, 7

Conread position: 226-407
Cow position: chr28:7371995-7372175 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 148, 160

Conread position: 228-405
Cow position: chr28:9426225-9426403 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 30

Conread position: 230-400
Cow position: chr28:11817841-11818013 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 144

Conread position: 231-346
Cow position: chr28:20046673-20046560 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 231-353
Cow position: chr28:12974003-12973881 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 27

Conread position: 231-365
Cow position: chr28:15362703-15362567 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 29

Conread position: 231-371
Cow position: chr28:5232057-5231920 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 231-381
Cow position: chr28:5254996-5254845 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 0

Conread position: 231-383
Cow position: chr28:12951539-12951393 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 231-393
Cow position: chr28:19295012-19295167 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 26

Conread position: 231-405
Cow position: chr28:13245683-13245508 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 150, 0

Conread position: 231-405
Cow position: chr28:19564108-19564283 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 142, 16

Conread position: 231-407
Cow position: chr28:4307774-4307957 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 14, 28

Conread position: 231-407
Cow position: chr28:5166889-5166713 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 150, 79

Conread position: 231-407
Cow position: chr28:7776379-7776557 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 100, 22

Conread position: 231-407
Cow position: chr28:10053203-10053386 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 231-407
Cow position: chr28:13090404-13090580 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 27

Conread position: 231-407
Cow position: chr28:18759933-18760101 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 152, 54

Conread position: 231-407
Cow position: chr28:20759580-20759755 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 231-407
Cow position: chr28:21363862-21363692 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 149, 81

Conread position: 231-407
Cow position: chr28:22321541-22321373 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 231-407
Cow position: chr28:26922246-26922420 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 232-352
Cow position: chr28:26784121-26784240 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 232-368
Cow position: chr28:13048163-13048298 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 26

Conread position: 232-400
Cow position: chr28:17601754-17601922 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 141, 130

Conread position: 232-407
Cow position: chr28:23007609-23007787 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 232-407
Cow position: chr28:33322580-33322400 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 233-381
Cow position: chr28:22133030-22132882 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 25

Conread position: 233-402
Cow position: chr28:34843455-34843623 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 82

Conread position: 233-407
Cow position: chr28:2524062-2523887 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 140, 54

Conread position: 233-407
Cow position: chr28:24672385-24672211 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 25

Conread position: 233-407
Cow position: chr28:30865537-30865364 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 78

Conread position: 234-379
Cow position: chr28:25763142-25762996 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 23

Conread position: 234-403
Cow position: chr28:6059351-6059520 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 235-382
Cow position: chr28:7156955-7156809 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 134, 0

Conread position: 235-387
Cow position: chr28:26372855-26372708 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 235-390
Cow position: chr28:9294375-9294532 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 125

Conread position: 235-401
Cow position: chr28:20397252-20397418 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 235-402
Cow position: chr28:3726091-3726262 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 94, 104

Conread position: 235-407
Cow position: chr28:4765794-4765622 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 138

Conread position: 235-407
Cow position: chr28:7805304-7805478 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 149, 120

Conread position: 235-407
Cow position: chr28:13865957-13865789 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 146, 44

Conread position: 236-383
Cow position: chr28:26719460-26719314 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 135, 0

Conread position: 236-391
Cow position: chr28:14512650-14512494 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 237-406
Cow position: chr28:22571552-22571719 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 137, 102

Conread position: 237-407
Cow position: chr28:8347847-8347678 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 21

Conread position: 238-407
Cow position: chr28:13176573-13176737 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 74

Conread position: 242-426
Cow position: chr28:4138560-4138738 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 130, 0

Conread position: 243-407
Cow position: chr28:1838095-1837941 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 243-407
Cow position: chr28:32365953-32365789 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 138
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 137, 10

Conread position: 246-386
Cow position: chr28:19345357-19345216 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 46

Conread position: 248-372
Cow position: chr28:555609-555485 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 248-406
Cow position: chr28:25728299-25728147 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 248-407
Cow position: chr28:11786612-11786771 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 124

Conread position: 249-405
Cow position: chr28:18625337-18625180 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 137, 9

Conread position: 251-407
Cow position: chr28:23676240-23676085 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 0

Conread position: 255-369
Cow position: chr28:23834503-23834389 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 261-407
Cow position: chr28:25283286-25283148 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 271-390
Cow position: chr28:21046494-21046615 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 274-407
Cow position: chr28:5827029-5826898 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 97, 0

Show alignments to all cow chromosomes.