Cow genome map
| Conread name: | Pla1-C0000935_J05 |
| Conread position: | 148-363 |
| Cow position: | chr11:2285339-2285559 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 159 |
| Conread position: | 151-359 |
| Cow position: | chr11:52936437-52936647 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 154-355 |
| Cow position: | chr11:10850755-10850957 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 110 |
| Conread position: | 154-363 |
| Cow position: | chr11:35738708-35738496 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 151 |
| Conread position: | 162-349 |
| Cow position: | chr11:29614035-29614222 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 142 |
| Conread position: | 163-349 |
| Cow position: | chr11:58820028-58820215 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 131 |
| Conread position: | 163-355 |
| Cow position: | chr11:44254718-44254910 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-355 |
| Cow position: | chr11:65281663-65281855 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 109, 141 |
| Conread position: | 163-363 |
| Cow position: | chr11:3495687-3495889 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chr11:7121319-7121117 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 101, 143 |
| Conread position: | 163-363 |
| Cow position: | chr11:9707792-9707994 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr11:10958475-10958676 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 130 |
| Conread position: | 163-363 |
| Cow position: | chr11:20731578-20731376 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr11:28125159-28125361 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr11:33601984-33601781 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 140 |
| Conread position: | 163-363 |
| Cow position: | chr11:44154434-44154232 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 140 |
| Conread position: | 163-363 |
| Cow position: | chr11:44515129-44514927 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr11:44516525-44516323 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr11:53429378-53429176 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 141 |
| Conread position: | 163-363 |
| Cow position: | chr11:63390835-63390633 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 166-355 |
| Cow position: | chr11:24494161-24493972 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 98, 138 |
| Conread position: | 166-355 |
| Cow position: | chr11:39483929-39484118 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 131 |
| Conread position: | 166-359 |
| Cow position: | chr11:8819858-8820051 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 37 |
| Conread position: | 166-359 |
| Cow position: | chr11:35570563-35570371 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 76 |
| Conread position: | 166-362 |
| Cow position: | chr11:81317641-81317444 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 112, 44 |
| Conread position: | 166-364 |
| Cow position: | chr11:56891571-56891372 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 138 |
| Conread position: | 166-366 |
| Cow position: | chr11:84214068-84213880 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 166-368 |
| Cow position: | chr11:66568699-66568897 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 172-358 |
| Cow position: | chr11:27889484-27889673 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 79 |
| Conread position: | 181-355 |
| Cow position: | chr11:22546432-22546610 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 112 |
Show alignments to all cow chromosomes.