Cow genome map
| Conread name: | Pla1-C0000935_J05 |
| Conread position: | 106-357 |
| Cow position: | chr3:66736761-66736512 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 164, 19 |
| Conread position: | 139-355 |
| Cow position: | chr3:10931708-10931920 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 23 |
| Conread position: | 143-359 |
| Cow position: | chr3:14881685-14881469 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 52 |
| Conread position: | 148-363 |
| Cow position: | chr3:52150441-52150225 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 116, 12 |
| Conread position: | 152-359 |
| Cow position: | chr3:67781312-67781522 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 162 |
| Conread position: | 161-363 |
| Cow position: | chr3:36614372-36614168 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 143 |
| Conread position: | 162-355 |
| Cow position: | chr3:48603109-48603302 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 142 |
| Conread position: | 163-355 |
| Cow position: | chr3:1740014-1739822 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-355 |
| Cow position: | chr3:24443235-24443044 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 163-363 |
| Cow position: | chr3:823232-823029 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:2572386-2572588 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:2708010-2707808 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:2866796-2866594 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:6713866-6714068 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:10243520-10243722 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:12664792-12664994 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:13723854-13723651 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:29574267-29574065 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 140 |
| Conread position: | 163-363 |
| Cow position: | chr3:30616078-30615876 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:35342509-35342711 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:40048748-40048950 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 109, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:41207738-41207536 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 95, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:43190411-43190209 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:49542342-49542140 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:53518695-53518897 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:56297243-56297445 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:56485401-56485199 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chr3:68697106-68696904 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 143 |
| Conread position: | 163-363 |
| Cow position: | chr3:75038983-75038781 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-364 |
| Cow position: | chr3:23204814-23204612 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 194, 140 |
| Conread position: | 163-364 |
| Cow position: | chr3:38095758-38095961 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 141 |
| Conread position: | 165-357 |
| Cow position: | chr3:27222910-27223101 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 113, 102 |
| Conread position: | 166-359 |
| Cow position: | chr3:9995490-9995301 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 166-363 |
| Cow position: | chr3:49134675-49134476 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 138 |
| Conread position: | 166-363 |
| Cow position: | chr3:64317602-64317800 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 127 |
| Conread position: | 166-364 |
| Cow position: | chr3:40344096-40344296 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 138 |
| Conread position: | 166-367 |
| Cow position: | chr3:56153168-56153367 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 128 |
| Conread position: | 166-388 |
| Cow position: | chr3:48034410-48034188 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 114, 12 |
| Conread position: | 167-363 |
| Cow position: | chr3:15416329-15416527 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 137 |
| Conread position: | 168-361 |
| Cow position: | chr3:31321200-31321391 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 110, 52 |
| Conread position: | 169-357 |
| Cow position: | chr3:61554816-61554627 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 129 |
| Conread position: | 181-355 |
| Cow position: | chr3:76649229-76649054 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 112 |
| Conread position: | 218-357 |
| Cow position: | chr3:64413152-64413009 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
Show alignments to all cow chromosomes.