Cow genome map
| Conread name: | Pla1-C0000935_J05 |
| Conread position: | 146-364 |
| Cow position: | chrX:16278383-16278599 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 118, 51 |
| Conread position: | 154-343 |
| Cow position: | chrX:19396962-19397153 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 154-365 |
| Cow position: | chrX:39387740-39387523 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 13, 151 |
| Conread position: | 162-363 |
| Cow position: | chrX:4623214-4623011 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 142 |
| Conread position: | 163-329 |
| Cow position: | chrX:13800978-13800813 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 95 |
| Conread position: | 163-355 |
| Cow position: | chrX:29225218-29225410 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-357 |
| Cow position: | chrX:26231018-26230824 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-357 |
| Cow position: | chrX:27304671-27304865 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-357 |
| Cow position: | chrX:38231527-38231333 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:4342492-4342693 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:5289944-5289742 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:5865886-5866088 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:7484547-7484749 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:12144839-12145041 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 143 |
| Conread position: | 163-363 |
| Cow position: | chrX:14462061-14462262 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:15978211-15978009 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 101, 143 |
| Conread position: | 163-363 |
| Cow position: | chrX:18193430-18193632 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:19398518-19398720 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:21892248-21892450 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:22837722-22837924 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 109, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:23279767-23279969 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:26755899-26755697 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:27317971-27318173 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:32145516-32145313 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:35532596-35532798 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 163-363 |
| Cow position: | chrX:36535989-36535787 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 95, 141 |
| Conread position: | 163-364 |
| Cow position: | chrX:11951030-11950827 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 141 |
| Conread position: | 163-364 |
| Cow position: | chrX:16854625-16854422 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 163-364 |
| Cow position: | chrX:26530713-26530916 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 89, 141 |
| Conread position: | 165-349 |
| Cow position: | chrX:37753168-37753349 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 79 |
| Conread position: | 166-337 |
| Cow position: | chrX:16407295-16407466 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 112, 135 |
| Conread position: | 166-353 |
| Cow position: | chrX:23269444-23269259 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 113, 32 |
| Conread position: | 166-354 |
| Cow position: | chrX:25052178-25051991 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 64 |
| Conread position: | 166-355 |
| Cow position: | chrX:302862-303049 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 78 |
| Conread position: | 166-355 |
| Cow position: | chrX:26341458-26341271 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 113, 92 |
| Conread position: | 166-355 |
| Cow position: | chrX:30435875-30435686 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 105, 138 |
| Conread position: | 166-355 |
| Cow position: | chrX:34094449-34094638 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 105, 138 |
| Conread position: | 166-359 |
| Cow position: | chrX:21658292-21658486 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 108, 159 |
| Conread position: | 166-359 |
| Cow position: | chrX:25016443-25016248 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 166-363 |
| Cow position: | chrX:15349470-15349271 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 138 |
| Conread position: | 166-363 |
| Cow position: | chrX:39745999-39746197 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 137 |
| Conread position: | 167-357 |
| Cow position: | chrX:21206944-21206756 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 113, 77 |
| Conread position: | 167-363 |
| Cow position: | chrX:387878-388074 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 77 |
| Conread position: | 168-359 |
| Cow position: | chrX:18289338-18289148 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 110, 99 |
| Conread position: | 168-363 |
| Cow position: | chrX:16858928-16858730 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 169-357 |
| Cow position: | chrX:33997283-33997469 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 109, 21 |
| Conread position: | 189-355 |
| Cow position: | chrX:23906857-23906694 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 112 |
| Conread position: | 194-340 |
| Cow position: | chrX:19650893-19650748 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 103 |
Show alignments to all cow chromosomes.